Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 2.9e-165 585.1 289 100.0
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 1.7e-80 303.5 293 60.1
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.7e-72 276.9 292 55.5
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 2.0e-57 226.9 290 47.9
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 1.9e-47 193.7 292 45.5
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 7.2e-47 191.8 350 37.4
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 1.2e-46 191.0 263 47.1
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 1.6e-46 190.7 276 46.0
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 4.7e-46 189.1 284 46.5
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 1.7e-43 180.6 318 41.8
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 4.1e-42 176.0 287 43.2
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.6e-41 174.1 296 42.2
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 2.3e-40 170.2 283 40.6
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 3.9e-40 169.5 298 41.9
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 5.6e-39 165.6 287 41.1
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 5.6e-39 165.6 300 41.7
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 7.3e-39 165.2 289 38.8
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 9.5e-39 164.9 287 41.8
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.2e-38 164.5 300 41.3
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 2.8e-38 163.3 272 43.8
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 3.6e-38 162.9 297 40.1
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 3.6e-38 162.9 283 39.6
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 6.1e-38 162.2 328 35.4
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 6.1e-38 162.2 322 38.2
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 8.9e-37 158.3 291 39.5
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 2.0e-36 157.1 292 40.8
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 2.6e-36 156.8 290 40.0
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.6e-36 156.8 292 38.0
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 3.4e-36 156.4 294 40.1
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 5.8e-36 155.6 322 37.0
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 1.3e-35 154.5 308 39.6
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 2.9e-35 153.3 299 39.1
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 8.3e-35 151.8 340 35.6
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 1.1e-34 151.4 253 40.3
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.9e-34 150.6 286 37.8
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 2.4e-34 150.2 304 35.5
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 3.2e-34 149.8 295 38.3
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 4.1e-34 149.4 289 38.4
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 7.0e-34 148.7 295 38.6
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 7.0e-34 148.7 302 38.4
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 9.2e-34 148.3 253 39.9
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.2e-33 147.9 300 36.7
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 2.0e-33 147.1 312 37.5
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 3.5e-33 146.4 295 37.6
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 7.8e-33 145.2 292 34.9
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.0e-32 144.8 281 38.1
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.0e-32 144.8 289 39.1
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 1.0e-32 144.8 292 38.4
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 2.3e-32 143.7 334 35.3
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 6.6e-32 142.1 254 39.8
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 6.6e-32 142.1 272 36.0
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 8.6e-32 141.7 293 36.2
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 1.9e-31 140.6 252 38.9
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 2.5e-31 140.2 300 34.0
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 3.3e-31 139.8 316 36.7
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.3e-31 139.8 292 36.6
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 3.3e-31 139.8 295 35.9
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 8.0e-30 135.2 293 34.8
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 4.0e-29 132.9 166 48.8
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 6.8e-29 132.1 126 56.3
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 8.9e-29 131.7 309 34.0
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 2.0e-28 130.6 273 34.1
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 4.4e-28 129.4 296 31.1
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 2.2e-27 127.1 153 51.0
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 6.4e-27 125.6 302 33.8
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.9e-26 124.0 276 35.5
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 3.2e-26 123.2 312 33.3
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 7.1e-26 122.1 336 31.8
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 9.2e-26 121.7 191 43.5
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.6e-25 120.9 269 35.3
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.1e-25 120.6 282 33.3
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 3.5e-25 119.8 294 32.3
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 7.8e-25 118.6 121 54.5
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 1.0e-24 118.2 320 33.8
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.3e-24 117.9 319 33.5
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 5.1e-24 115.9 325 31.7
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 6.6e-24 115.5 132 49.2
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.5e-23 114.4 315 32.4
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.9e-23 114.0 187 40.6
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 2.5e-23 113.6 120 50.8
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.6e-22 110.9 155 45.2
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 3.6e-22 109.8 271 33.6
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 6.2e-22 109.0 300 32.0
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 8.1e-22 108.6 253 34.8
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 4.0e-21 106.3 212 36.8
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 2.6e-20 103.6 118 51.7
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 4.4e-20 102.8 323 28.2
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 2.9e-19 100.1 153 40.5
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 8.3e-19 98.6 169 40.2
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 4.1e-18 96.3 283 29.3
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.2e-17 94.7 153 41.8
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 3.3e-15 86.7 249 30.1
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 6.2e-14 82.4 111 44.1
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 1.9e-10 70.9 133 36.8
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 5.4e-10 69.3 149 30.2
FAN20G1411 Fragaria x ananassa HOM05D023021 ORTHO05D025344 1.6e-09 67.8 119 31.9
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.6e-09 67.8 58 56.9
FvH4_2g12851 Fragaria vesca HOM05D023021 ORTHO05D025344 2.7e-09 67.0 119 31.9
RcHm_v2.0_Chr6g0273881 Rosa chinensis HOM05D023021 ORTHO05D025344 2.7e-09 67.0 88 40.9
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.1e-08 62.8 58 55.2
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 5.1e-08 62.8 192 27.6
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 6.6e-08 62.4 189 30.7
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 1.1e-07 61.6 246 25.6
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 3.3e-07 60.1 114 34.2
DCAR_014326 Daucus carota HOM05D007372 ORTHO05D009318 4.8e-06 56.2 206 25.2


User provided reference genes

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