Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 2.0e-49 198.7 98 100.0
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 6.7e-37 157.1 101 81.2
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 2.0e-36 155.6 101 80.2
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 2.2e-35 152.1 102 77.5
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 6.9e-34 147.1 102 75.5
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 2.0e-33 145.6 99 75.8
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 4.2e-31 137.9 101 72.3
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 7.2e-31 137.1 103 72.8
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.6e-30 136.0 100 73.0
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 3.6e-30 134.8 103 69.9
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.4e-29 132.9 101 72.3
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.4e-29 132.9 101 73.3
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.4e-29 132.9 101 73.3
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.8e-29 132.5 101 72.3
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 3.9e-29 131.3 101 71.3
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.9e-29 131.3 103 69.9
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 5.1e-29 131.0 101 72.3
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 5.1e-29 131.0 102 68.6
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 8.8e-29 130.2 102 71.6
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.1e-28 129.8 101 69.3
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.1e-28 129.8 101 69.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.1e-28 129.8 101 71.3
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 3.3e-28 128.3 99 70.7
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 3.3e-28 128.3 102 70.6
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 3.3e-28 128.3 102 68.6
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 4.4e-28 127.9 101 70.3
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 7.4e-28 127.1 99 69.7
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 7.4e-28 127.1 101 68.3
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 7.4e-28 127.1 102 68.6
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.7e-28 126.7 102 67.6
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.7e-28 126.7 102 67.6
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 9.7e-28 126.7 102 67.6
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.7e-27 125.9 103 70.9
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 3.7e-27 124.8 101 69.3
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.7e-27 124.8 99 68.7
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 4.8e-27 124.4 102 66.7
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 4.8e-27 124.4 97 68.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 8.2e-27 123.6 101 66.3
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 8.2e-27 123.6 102 66.7
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 8.2e-27 123.6 101 66.3
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 8.2e-27 123.6 102 67.6
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.1e-26 123.2 99 67.7
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.4e-26 122.9 104 66.3
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.8e-26 122.5 102 67.6
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 5.3e-26 120.9 100 68.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 5.3e-26 120.9 91 73.6
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 7.0e-26 120.6 105 64.8
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 9.1e-26 120.2 101 70.3
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 9.1e-26 120.2 100 69.0
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.2e-25 119.8 91 70.3
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 1.2e-25 119.8 100 65.0
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.5e-25 119.4 98 62.2
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.5e-25 119.4 96 69.8
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 2.0e-25 119.0 98 62.2
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 2.0e-25 119.0 104 64.4
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 2.0e-25 119.0 102 68.6
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.0e-25 119.0 102 65.7
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 2.0e-25 119.0 103 66.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 2.6e-25 118.6 104 64.4
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 4.5e-25 117.9 98 61.2
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 4.5e-25 117.9 102 65.7
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 4.5e-25 117.9 102 67.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 7.7e-25 117.1 101 69.3
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.0e-24 116.7 94 68.1
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.3e-24 116.3 100 67.0
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.7e-24 115.9 103 59.2
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.7e-24 115.9 103 59.2
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 2.2e-24 115.5 103 59.2
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 5.0e-24 114.4 103 63.1
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 8.5e-24 113.6 103 64.1
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.9e-23 112.5 105 60.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.9e-23 112.5 95 61.1
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 2.5e-23 112.1 94 64.9
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 2.5e-23 112.1 105 60.0
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 3.2e-23 111.7 105 60.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.6e-22 109.4 96 65.6
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 2.1e-22 109.0 105 59.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 6.1e-22 107.5 100 61.0
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.4e-21 106.3 97 64.9
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 4.0e-21 104.8 96 63.5
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 4.4e-20 101.3 103 55.3
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 4.4e-20 101.3 100 57.0
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 5.7e-20 100.9 103 55.3
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 5.7e-20 100.9 103 55.3
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 7.4e-20 100.5 100 56.0
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 1.3e-19 99.8 100 56.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-19 99.4 95 61.1
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 4.8e-19 97.8 102 53.9
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 8.2e-19 97.1 103 53.4
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 2.4e-18 95.5 99 55.6
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 7.7e-17 90.5 109 50.5
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 7.7e-17 90.5 81 61.7
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 6.1e-14 80.9 89 58.4
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 1.4e-13 79.7 103 49.5
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 3.0e-13 78.6 88 54.5
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 6.8e-13 77.4 79 58.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 2.6e-12 75.5 66 66.7
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 8.3e-11 70.5 93 49.5
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 4.1e-10 68.2 66 62.1
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.9e-07 59.3 61 57.4


User provided reference genes

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