Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.9e-149 532.7 315 100.0
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 8.8e-115 417.5 226 87.2
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 1.8e-112 409.8 225 84.9
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 4.1e-112 408.7 226 85.8
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.7e-110 403.3 224 84.4
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 4.3e-109 398.7 226 83.2
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 9.5e-109 397.5 227 82.8
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 2.8e-108 396.0 226 81.9
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 3.6e-108 395.6 225 83.6
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 4.7e-108 395.2 225 82.2
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 6.1e-108 394.8 225 81.8
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 3.0e-107 392.5 225 83.1
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 5.2e-107 391.7 225 81.3
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 6.8e-107 391.3 226 79.6
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 8.9e-107 391.0 225 82.2
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.9e-107 391.0 225 81.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.9e-107 391.0 225 81.8
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.5e-106 390.2 225 82.2
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 1.5e-106 390.2 225 81.8
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 2.0e-106 389.8 227 80.6
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 2.0e-106 389.8 225 80.9
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 4.4e-106 388.7 227 81.9
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 9.8e-106 387.5 226 81.0
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.3e-105 387.1 226 81.4
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.3e-105 387.1 227 81.9
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 1.3e-105 387.1 225 80.4
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-105 386.3 225 80.4
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 2.2e-105 386.3 225 80.4
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 2.9e-105 386.0 225 80.4
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 1.4e-104 383.6 226 79.6
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 1.4e-104 383.6 225 79.1
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 3.2e-104 382.5 245 75.5
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 4.1e-104 382.1 225 77.3
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 7.0e-104 381.3 225 77.3
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 2.7e-103 379.4 225 78.7
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 4.6e-103 378.6 219 81.3
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 7.8e-103 377.9 225 77.8
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 1.3e-102 377.1 223 77.1
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.3e-102 377.1 225 76.0
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 1.7e-102 376.7 225 77.3
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.7e-102 376.7 225 76.4
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 2.3e-102 376.3 225 76.4
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 3.9e-102 375.6 226 75.2
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 5.0e-102 375.2 225 76.9
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 6.6e-102 374.8 225 76.4
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 8.6e-102 374.4 226 75.7
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.1e-101 374.0 225 81.3
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.5e-101 373.6 226 79.2
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 5.6e-101 371.7 225 76.4
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 5.6e-101 371.7 228 74.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 9.5e-101 370.9 225 76.4
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 2.8e-100 369.4 224 76.8
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.6e-100 369.0 225 74.7
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 6.2e-100 368.2 226 74.8
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 8.0e-100 367.9 225 74.7
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.4e-99 367.1 223 75.8
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 1.8e-99 366.7 223 75.3
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 1.8e-99 366.7 223 75.3
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 1.8e-99 366.7 223 75.3
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 1.8e-99 366.7 251 69.3
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 3.1e-99 365.9 223 75.3
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 3.1e-99 365.9 226 74.3
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 6.8e-99 364.8 223 74.9
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.2e-98 364.0 225 74.2
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.2e-98 364.0 226 77.4
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 3.4e-98 362.5 299 61.5
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 5.8e-98 361.7 225 74.7
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.2e-97 359.8 230 73.5
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 5.4e-96 355.1 259 66.4
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 1.6e-95 353.6 223 70.9
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.0e-95 353.2 226 73.5
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 2.7e-95 352.8 226 71.7
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 6.0e-95 351.7 199 82.4
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 1.0e-94 350.9 225 71.6
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 3.0e-94 349.4 222 69.4
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 3.9e-94 349.0 221 70.1
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 6.2e-92 341.7 265 62.3
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 4.0e-91 339.0 224 69.2
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 1.1e-88 330.9 226 67.3
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.9e-81 306.2 261 57.5
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 1.2e-79 300.8 225 64.9
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 3.0e-78 296.2 184 75.0
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 3.3e-77 292.7 223 62.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 2.8e-76 289.7 225 62.2
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 1.5e-74 283.9 155 85.2
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 9.9e-74 281.2 225 60.4
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.9e-73 279.6 228 65.8
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 2.1e-71 273.5 230 57.4
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 2.7e-71 273.1 155 79.4
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 3.5e-71 272.7 155 80.6
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 7.8e-71 271.6 205 62.9
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 7.8e-71 271.6 205 62.9
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 3.9e-70 269.2 169 71.6
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 5.1e-70 268.9 199 64.3
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.1e-69 267.7 168 74.4
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.1e-67 261.2 168 73.2
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.3e-65 254.2 156 76.9
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 8.4e-65 251.5 223 52.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.8e-62 243.8 221 49.3
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 3.1e-59 233.0 213 51.6
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 3.4e-58 229.6 141 72.3
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 2.4e-51 206.8 140 72.1
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 4.0e-51 206.1 168 61.9
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 2.2e-49 200.3 115 81.7
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 6.5e-49 198.7 225 48.9
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 6.5e-49 198.7 225 48.9
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 6.1e-39 165.6 104 71.2
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-37 161.0 104 70.2
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 3.4e-34 149.8 92 77.2
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 8.5e-33 145.2 219 35.2
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.2e-31 141.4 104 64.4
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 7.9e-31 138.7 96 68.8
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 1.0e-22 111.7 228 32.5
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 2.0e-21 107.5 218 34.4
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 9.7e-21 105.1 64 73.4
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 2.5e-16 90.5 57 75.4
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 7.2e-16 89.0 229 29.3
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 2.1e-07 60.8 116 37.9
AUR62040742 Chenopodium quinoa HOM05D006863 ORTHO05D137998 8.8e-06 55.5 48 60.4


User provided reference genes

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