Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.9e-161 572.4 284 100.0
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.0e-114 415.6 318 70.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.7e-112 408.7 317 70.3
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.9e-109 399.1 310 69.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.6e-107 393.3 372 60.5
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 6.3e-104 381.3 312 65.4
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.4e-103 380.2 316 64.6
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 2.4e-103 379.4 314 65.6
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.0e-103 377.9 316 63.9
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 7.0e-103 377.9 311 64.6
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 9.1e-103 377.5 316 64.6
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 9.1e-103 377.5 318 62.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.2e-102 377.1 314 64.6
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.2e-102 377.1 316 63.9
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.5e-102 375.6 314 64.3
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.3e-101 372.9 309 64.1
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 6.6e-101 371.3 316 63.6
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 3.3e-100 369.0 314 64.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.0e-98 364.0 314 62.4
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.2e-98 361.7 318 64.2
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 3.4e-97 359.0 322 60.6
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 5.7e-97 358.2 320 60.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 5.7e-97 358.2 317 62.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.5e-97 357.8 315 60.6
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 7.5e-97 357.8 329 59.3
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 7.5e-97 357.8 276 67.4
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 9.8e-97 357.5 329 59.9
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.3e-96 357.1 303 63.4
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.1e-95 354.0 277 67.1
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.4e-95 353.6 329 59.0
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.8e-95 353.2 300 63.0
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.4e-95 351.7 318 60.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.0e-94 349.7 316 62.7
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.3e-93 347.1 318 59.1
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.3e-93 347.1 314 61.1
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.0e-93 345.9 322 60.2
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 3.0e-93 345.9 312 61.2
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 8.6e-93 344.4 304 61.2
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.5e-92 343.6 320 59.4
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 5.6e-92 341.7 321 58.9
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 9.5e-92 340.9 315 59.7
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.6e-91 340.1 267 65.2
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.1e-91 339.7 295 62.7
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 3.6e-91 339.0 318 58.8
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.6e-91 339.0 321 59.8
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 6.2e-91 338.2 376 52.4
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.4e-90 337.0 306 61.8
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 3.1e-90 335.9 306 59.8
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.2e-89 334.0 263 66.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.2e-89 334.0 306 59.2
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.5e-89 333.6 266 67.3
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.5e-89 333.6 268 65.7
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 2.0e-89 333.2 298 60.1
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.0e-89 333.2 273 63.7
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 4.4e-89 332.0 319 57.4
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 9.8e-89 330.9 318 57.9
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.3e-88 330.5 264 64.8
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 3.2e-87 325.9 296 59.1
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 3.2e-87 325.9 318 56.6
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 4.6e-86 322.0 319 55.8
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.7e-85 320.1 316 56.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 3.9e-85 318.9 296 58.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 5.0e-85 318.5 287 59.2
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 5.0e-85 318.5 324 54.9
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 8.6e-85 317.8 313 55.3
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 8.6e-85 317.8 270 61.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.5e-84 317.0 300 58.7
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.5e-84 317.0 297 58.2
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.5e-84 317.0 276 60.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.5e-84 316.2 232 68.1
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 2.5e-84 316.2 303 57.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 3.3e-84 315.8 272 61.4
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.3e-84 315.8 300 58.0
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 7.3e-84 314.7 297 55.9
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.2e-83 313.9 302 56.3
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.2e-83 313.9 256 64.1
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.6e-83 313.5 242 65.3
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 2.1e-83 313.2 302 56.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.6e-83 312.4 268 60.1
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 6.2e-83 311.6 306 56.2
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 8.1e-83 311.2 276 58.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.1e-82 310.8 335 53.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.1e-82 310.8 260 60.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.4e-82 310.5 276 58.7
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.4e-82 310.5 266 60.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.8e-82 310.1 268 60.4
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.4e-79 299.7 258 61.2
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.9e-77 292.4 273 59.0
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.1e-75 286.6 298 53.7
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 6.8e-74 281.6 411 43.1
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 7.6e-73 278.1 208 67.3
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 9.9e-73 277.7 279 52.3
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 3.7e-72 275.8 241 58.1
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.9e-71 273.5 282 56.0
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.9e-66 254.6 146 82.9
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.4e-63 246.5 269 48.0
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.3e-61 240.7 243 57.2
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.6e-59 233.8 255 50.2
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 6.2e-59 231.9 134 79.9
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.3e-58 228.8 134 82.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 5.3e-58 228.8 275 44.7
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.2e-56 223.4 135 78.5
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 8.4e-56 221.5 262 42.7
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.2e-54 217.6 262 48.1
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 7.9e-54 214.9 263 43.3
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 6.0e-46 188.7 157 58.6
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.9e-44 183.7 134 61.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.8e-40 169.5 164 56.1
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 2.5e-28 130.2 238 31.5
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 5.7e-28 129.0 235 38.7
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.8e-19 100.1 243 27.2
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.7e-16 90.9 277 27.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.9e-16 90.1 294 27.9
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 4.2e-15 86.3 102 46.1
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.0e-13 80.1 96 47.9
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 8.8e-13 78.6 82 48.8
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.7e-06 57.0 81 45.7


User provided reference genes

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