Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 3.8e-45 184.5 96 100.0
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 5.4e-31 137.5 71 87.3
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 7.0e-31 137.1 87 74.7
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 2.3e-29 132.1 86 72.1
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 3.0e-29 131.7 81 74.1
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 2.5e-28 128.6 86 72.1
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 1.6e-27 125.9 84 72.6
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 3.6e-27 124.8 77 76.6
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 4.7e-27 124.4 83 71.1
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 8.0e-27 123.6 81 70.4
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 1.1e-26 123.2 77 75.3
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 1.4e-26 122.9 82 70.7
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 1.8e-26 122.5 83 71.1
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 1.8e-26 122.5 84 72.6
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 2.3e-26 122.1 77 75.3
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 8.9e-26 120.2 72 75.0
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 1.2e-25 119.8 71 76.1
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.5e-25 119.4 71 81.7
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 2.6e-25 118.6 82 65.9
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 2.6e-25 118.6 89 69.7
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 3.4e-25 118.2 79 68.4
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 5.8e-25 117.5 71 81.7
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 1.3e-24 116.3 86 66.3
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 1.7e-24 115.9 81 63.0
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 1.7e-24 115.9 82 68.3
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 2.2e-24 115.5 81 63.0
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 2.2e-24 115.5 83 67.5
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 2.9e-24 115.2 83 71.1
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 3.7e-24 114.8 96 64.6
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 4.9e-24 114.4 85 62.4
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 4.9e-24 114.4 85 62.4
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 8.3e-24 113.6 67 80.6
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 8.3e-24 113.6 72 75.0
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.9e-23 112.5 78 67.9
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.9e-23 112.5 80 71.2
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 2.4e-23 112.1 83 66.3
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 5.4e-23 110.9 71 71.8
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 7.1e-23 110.5 80 70.0
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 9.2e-23 110.2 73 71.2
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 1.2e-22 109.8 72 72.2
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 1.6e-22 109.4 86 64.0
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 2.1e-22 109.0 78 71.8
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 3.5e-22 108.2 71 71.8
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 1.7e-21 105.9 80 63.8
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 1.7e-21 105.9 73 68.5
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 1.7e-21 105.9 71 69.0
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 1.7e-21 105.9 71 69.0
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 3.0e-21 105.1 70 68.6
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 3.0e-21 105.1 71 69.0
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 5.1e-21 104.4 81 63.0
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 6.6e-21 104.0 71 67.6
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 8.6e-21 103.6 85 60.0
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.1e-20 103.2 85 64.7
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 1.5e-20 102.8 76 65.8
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 1.5e-20 102.8 71 67.6
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 1.5e-20 102.8 90 57.8
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 5.6e-20 100.9 76 63.2
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 7.3e-20 100.5 98 56.1
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 9.5e-20 100.1 88 56.8
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 1.6e-19 99.4 88 55.7
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 2.1e-19 99.0 69 71.0
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 3.6e-19 98.2 76 61.8
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 3.6e-19 98.2 88 55.7
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 6.2e-19 97.4 74 63.5
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 8.1e-19 97.1 74 63.5
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 8.1e-19 97.1 74 63.5
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 1.1e-18 96.7 69 65.2
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 1.4e-18 96.3 76 65.8
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 3.1e-18 95.1 88 54.5
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 5.2e-18 94.4 71 67.6
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 2.0e-17 92.4 68 63.2
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 5.8e-17 90.9 66 63.6
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 2.2e-16 89.0 90 57.8
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 1.4e-15 86.3 81 55.6
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.9e-15 85.9 53 75.5
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.9e-15 85.9 53 75.5
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 1.6e-14 82.8 71 57.7
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 3.9e-13 78.2 71 49.3
SGA_v2.0_scaffold7G04151 Striga asiatica HOM05D000252 ORTHO05D000307 7.3e-12 73.9 52 63.5
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 2.0e-09 65.9 59 52.5
SGA_v2.0_scaffold114G31816 Striga asiatica HOM05D007721 ORTHO05D009811 1.6e-06 56.2 44 54.5
ECA248G3328 Erigeron canadensis HOM05D000152 ORTHO05D001046 2.7e-06 55.5 53 47.2
TWI34G0772 Tripterygium wilfordii HOM05D007721 ORTHO05D009811 3.5e-06 55.1 62 50.0
arahy.Tifrunner.gnm1.ann1.K7RUU1 Arachis hypogaea HOM05D007721 ORTHO05D009811 6.0e-06 54.3 35 65.7
Medtr3g018660 Medicago truncatula HOM05D007721 ORTHO05D009811 7.8e-06 53.9 27 88.9


User provided reference genes

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