Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 2.5e-96 355.5 190 100.0
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 5.2e-62 241.5 188 73.9
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 6.0e-50 201.4 168 71.4
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 3.9e-49 198.7 189 63.0
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 7.3e-48 194.5 188 61.2
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 9.0e-46 187.6 189 55.0
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 8.4e-44 181.0 186 52.7
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 2.4e-38 162.9 193 50.8
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 6.9e-38 161.4 188 51.6
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 2.0e-37 159.8 190 52.1
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 1.3e-36 157.1 190 49.5
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.1e-35 154.1 190 49.5
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 2.7e-34 149.4 189 50.3
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 4.6e-34 148.7 194 54.6
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 3.9e-33 145.6 189 49.7
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 1.1e-32 144.1 203 48.3
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 1.5e-32 143.7 240 39.6
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 1.9e-32 143.3 191 50.3
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 3.3e-32 142.5 201 49.8
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 5.9e-29 131.7 175 47.4
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 1.1e-27 127.5 184 44.0
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 2.5e-27 126.3 218 45.0
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.2e-26 124.0 202 44.1
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 1.6e-26 123.6 188 46.3
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.6e-26 123.6 191 42.9
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 1.5e-24 117.1 197 43.1
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 4.3e-24 115.5 188 41.0
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 4.3e-24 115.5 181 44.2
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 9.7e-24 114.4 194 41.8
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 1.3e-23 114.0 202 41.6
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 1.3e-23 114.0 198 41.9
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 4.8e-23 112.1 192 40.1
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 1.1e-22 110.9 195 43.6
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 3.1e-22 109.4 191 42.9
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 5.3e-22 108.6 206 42.2
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 1.2e-21 107.5 203 39.4
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.5e-21 107.1 203 39.4
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 2.6e-21 106.3 202 39.1
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 2.6e-21 106.3 202 39.1
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 4.5e-21 105.5 167 43.1
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 7.7e-21 104.8 206 38.3
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.0e-20 104.4 202 38.6
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 1.3e-20 104.0 167 42.5
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 2.2e-20 103.2 167 42.5
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 5.0e-20 102.1 202 39.6
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.1e-19 100.9 203 37.4
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.9e-19 100.1 203 38.9
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 2.5e-19 99.8 198 38.9
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 3.2e-19 99.4 204 37.7
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 4.2e-19 99.0 206 37.4
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 5.5e-19 98.6 192 39.1
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 1.6e-18 97.1 166 40.4
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 2.7e-18 96.3 179 38.5
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 3.6e-18 95.9 191 40.8
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 1.4e-17 94.0 203 38.9
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 1.8e-17 93.6 208 37.5
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 3.9e-17 92.4 195 36.4
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 1.5e-16 90.5 212 42.0
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 3.3e-16 89.4 194 37.1
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 4.3e-16 89.0 203 38.9
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 5.7e-16 88.6 203 38.9
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 2.8e-15 86.3 194 36.6
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 3.1e-14 82.8 64 64.1
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 7.7e-13 78.2 193 36.3
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 7.7e-13 78.2 186 37.1
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 1.0e-12 77.8 193 35.8
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 2.2e-12 76.6 213 34.7
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.6e-10 70.5 108 42.6
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 3.9e-09 65.9 85 47.1
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 1.5e-08 63.9 126 37.3
Nn7g36303 Nelumbo nucifera HOM05D007739 ORTHO05D009838 2.0e-08 63.5 59 64.4
Aqoxy1G02236 Aquilegia oxysepala HOM05D007739 ORTHO05D009838 5.3e-06 55.5 141 29.8
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 9.1e-06 54.7 135 35.6
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 9.1e-06 54.7 86 40.7


User provided reference genes

Program Settings