Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.2e-148 529.6 242 100.0
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 7.5e-114 414.1 239 77.0
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 9.8e-114 413.7 239 76.2
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 4.9e-113 411.4 239 75.7
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 9.8e-106 387.1 240 71.7
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 2.5e-101 372.5 242 69.0
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 5.6e-101 371.3 240 67.1
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.6e-100 369.8 230 72.6
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.6e-100 369.8 240 67.5
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 6.2e-100 367.9 246 67.1
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.4e-99 366.7 239 71.1
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 6.8e-99 364.4 239 70.7
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.2e-98 363.6 237 67.5
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.0e-98 362.8 240 69.6
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 5.8e-98 361.3 239 70.7
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 2.1e-95 352.8 235 66.4
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 2.3e-94 349.4 248 64.9
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 8.6e-94 347.4 240 65.0
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.1e-93 347.1 239 63.2
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.9e-93 346.3 248 63.3
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.9e-93 346.3 236 64.8
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 9.6e-93 344.0 248 63.3
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.6e-92 343.2 241 66.0
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 3.6e-92 342.0 227 67.8
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.8e-91 339.7 248 62.1
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.8e-91 339.7 242 63.6
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.8e-91 339.7 242 63.6
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 3.1e-91 339.0 240 61.7
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 4.0e-91 338.6 239 63.6
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 2.6e-90 335.9 263 58.6
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 3.4e-90 335.5 241 63.1
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.4e-90 335.5 226 65.0
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 7.6e-90 334.3 233 64.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 9.9e-90 334.0 239 62.3
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 4.9e-89 331.6 245 62.9
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 8.4e-89 330.9 245 62.9
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.4e-88 330.1 242 62.8
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 2.4e-88 329.3 221 66.5
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 7.1e-88 327.8 209 69.4
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 9.3e-88 327.4 251 60.6
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.2e-87 327.0 217 67.7
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.1e-87 326.2 224 67.0
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.7e-87 325.9 242 62.8
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 2.7e-87 325.9 229 63.3
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 4.6e-87 325.1 263 58.9
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 7.8e-87 324.3 238 61.8
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 7.8e-87 324.3 245 63.7
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 2.3e-86 322.8 217 66.4
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 2.3e-86 322.8 264 59.5
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 3.9e-86 322.0 241 61.4
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.6e-86 321.2 227 63.9
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.1e-85 320.5 248 62.5
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 3.3e-85 318.9 211 65.4
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 4.3e-85 318.5 229 62.9
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 9.6e-85 317.4 229 58.5
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 1.3e-84 317.0 229 61.6
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.8e-84 315.8 231 60.6
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 6.2e-84 314.7 234 58.1
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 1.1e-83 313.9 241 63.1
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.1e-83 313.9 246 62.2
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.8e-83 313.2 243 59.3
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.8e-83 313.2 270 58.5
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.8e-83 313.2 224 62.1
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.4e-83 312.8 241 63.1
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.1e-83 312.4 254 59.8
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 3.1e-83 312.4 240 61.7
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 6.9e-83 311.2 268 53.7
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 9.0e-83 310.8 242 62.8
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 3.4e-82 308.9 228 56.6
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 4.4e-82 308.5 246 60.6
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 9.9e-82 307.4 245 58.0
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 2.9e-81 305.8 260 54.6
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 4.9e-81 305.1 254 59.1
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.4e-81 304.7 203 66.5
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.2e-79 300.4 223 60.1
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 2.7e-79 299.3 223 61.9
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 3.5e-79 298.9 255 57.3
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 6.0e-79 298.1 173 75.7
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 7.9e-79 297.7 197 69.5
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 1.7e-78 296.6 251 59.4
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.7e-78 296.6 202 68.3
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 1.7e-78 296.6 224 58.5
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.3e-78 296.2 173 75.1
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.3e-78 296.2 173 75.1
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 3.0e-78 295.8 230 59.6
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 3.0e-78 295.8 230 59.6
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 3.0e-78 295.8 233 59.2
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 3.9e-78 295.4 219 60.3
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 6.6e-78 294.7 173 74.0
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 3.3e-77 292.4 238 57.6
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 6.2e-76 288.1 230 60.0
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 5.3e-75 285.0 214 60.7
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 5.3e-75 285.0 200 65.0
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 6.9e-75 284.6 233 57.5
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.0e-74 283.1 233 57.1
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.4e-72 276.2 224 56.2
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 7.1e-72 274.6 213 59.6
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.2e-71 273.9 213 62.4
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.7e-71 272.7 203 64.5
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 7.9e-71 271.2 229 55.0
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.8e-70 270.0 207 61.8
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.0e-66 256.5 234 56.0
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 6.5e-65 251.5 220 59.1
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 8.4e-65 251.1 201 61.2
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.5e-64 249.6 234 54.7
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 6.2e-60 235.0 191 59.2
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 1.4e-59 233.8 174 62.6
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 2.4e-59 233.0 160 64.4
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.4e-58 229.2 138 73.2
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 3.2e-56 222.6 165 60.6
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.8e-54 216.9 191 57.6
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 4.8e-52 208.8 235 48.9
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.4e-48 197.2 127 63.8
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.8e-36 156.4 171 47.4
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.0e-33 147.9 130 52.3
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.7e-33 147.1 130 50.0
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.1e-32 144.4 82 73.2
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 3.6e-31 139.4 91 60.4
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.6e-26 124.0 102 51.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 6.5e-17 92.0 178 34.8


User provided reference genes

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