Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 7.7e-118 427.2 218 100.0
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 1.9e-71 273.1 196 73.5
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 1.1e-66 257.3 237 61.6
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.9e-64 249.2 183 72.7
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 4.2e-47 192.2 202 56.9
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 3.5e-46 189.1 202 56.9
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 1.5e-44 183.7 206 57.3
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 3.3e-44 182.6 204 55.4
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 6.3e-43 178.3 192 53.1
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 1.1e-42 177.6 210 56.7
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 2.4e-42 176.4 210 51.0
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 3.1e-42 176.0 203 50.7
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 4.1e-42 175.6 185 54.1
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 6.9e-42 174.9 207 51.2
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 9.0e-42 174.5 200 51.0
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 2.6e-41 172.9 206 50.0
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 1.7e-40 170.2 199 50.8
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 1.7e-40 170.2 201 50.7
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 5.0e-40 168.7 203 50.7
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 1.4e-39 167.2 205 49.8
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 4.2e-39 165.6 196 49.5
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 4.2e-39 165.6 210 47.1
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 9.3e-39 164.5 205 46.3
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 4.6e-38 162.2 202 50.5
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 7.9e-38 161.4 137 60.6
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 3.0e-37 159.5 204 48.5
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 3.9e-37 159.1 114 69.3
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 3.9e-37 159.1 202 49.0
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 5.1e-37 158.7 187 51.9
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 1.5e-36 157.1 135 60.0
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 5.7e-36 155.2 167 52.7
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 5.7e-36 155.2 195 49.2
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 5.7e-36 155.2 133 63.2
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 9.7e-36 154.5 186 48.4
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 9.7e-36 154.5 211 47.4
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.3e-35 154.1 182 49.5
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 2.2e-35 153.3 200 46.5
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 2.2e-35 153.3 199 47.2
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 2.2e-35 153.3 164 51.2
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 3.7e-35 152.5 185 48.6
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 3.7e-35 152.5 185 48.6
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 4.8e-35 152.1 204 45.6
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 4.8e-35 152.1 204 49.0
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 1.1e-34 151.0 122 66.4
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.1e-34 151.0 112 67.0
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 4.1e-34 149.1 126 58.7
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 5.3e-34 148.7 158 49.4
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 3.4e-33 146.0 192 48.4
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 3.4e-33 146.0 186 47.3
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 4.5e-33 145.6 117 63.2
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.5e-33 145.6 117 63.2
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 4.5e-33 145.6 185 51.4
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 7.7e-33 144.8 110 65.5
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 1.0e-32 144.4 126 61.1
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.3e-32 144.1 117 63.2
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 1.3e-32 144.1 183 49.7
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 1.7e-32 143.7 118 65.3
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.2e-32 143.3 124 61.3
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 2.9e-32 142.9 185 47.0
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 3.8e-32 142.5 117 63.2
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 3.8e-32 142.5 188 45.2
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 6.5e-32 141.7 118 63.6
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 6.5e-32 141.7 146 55.5
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 1.4e-31 140.6 113 61.1
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 3.2e-31 139.4 196 46.9
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 3.2e-31 139.4 85 77.6
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 4.2e-31 139.0 181 47.5
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 5.5e-31 138.7 157 49.7
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 7.2e-31 138.3 196 46.4
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 9.4e-31 137.9 164 46.3
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.6e-30 137.1 157 49.0
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 1.6e-30 137.1 180 44.4
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 2.1e-30 136.7 157 49.0
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 2.1e-30 136.7 181 47.0
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 4.6e-30 135.6 197 46.2
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 4.6e-30 135.6 181 49.7
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 7.9e-30 134.8 186 47.8
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 1.4e-29 134.0 115 58.3
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 1.4e-29 134.0 179 43.0
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 2.3e-29 133.3 138 50.7
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 3.0e-29 132.9 122 59.0
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 3.0e-29 132.9 183 45.9
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 3.9e-29 132.5 161 46.6
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 5.1e-29 132.1 152 47.4
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 5.1e-29 132.1 202 42.6
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 1.1e-28 131.0 185 44.9
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 1.5e-28 130.6 84 71.4
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 2.0e-28 130.2 182 44.5
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 7.4e-28 128.3 189 43.9
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 9.7e-28 127.9 123 56.9
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 1.3e-27 127.5 187 43.9
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 8.2e-27 124.8 143 49.7
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 1.1e-26 124.4 164 47.0
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 2.4e-26 123.2 161 49.1
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 5.3e-26 122.1 184 46.2
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 7.7e-25 118.2 86 69.8
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 2.2e-24 116.7 186 41.4
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 1.0e-21 107.8 110 50.9
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 8.8e-21 104.8 234 34.2
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 8.8e-21 104.8 155 47.7
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 2.0e-20 103.6 111 48.6
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.3e-19 100.9 97 56.7
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.1e-18 97.8 108 46.3
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 1.1e-15 87.8 125 42.4
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 9.4e-15 84.7 78 51.3
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 9.4e-15 84.7 117 44.4
vmacro04046 Vaccinium macrocarpon HOM05D002956 ORTHO05D009000 1.4e-13 80.9 152 42.8
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 3.0e-13 79.7 93 47.3
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 3.3e-12 76.3 107 38.3
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 8.2e-11 71.6 102 37.3
Psat5g184640 Pisum sativum HOM05D002956 ORTHO05D009000 7.7e-09 65.1 126 40.5
Oeu027210.1 Olea europaea HOM05D002956 ORTHO05D009000 4.2e-07 59.3 68 48.5


User provided reference genes

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