Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 9.9e-300 1032.7 537 100.0
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 5.8e-215 751.1 534 74.3
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 7.1e-189 664.5 546 70.7
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 7.9e-180 634.4 538 64.3
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 6.9e-176 621.3 535 62.4
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.3e-174 617.1 539 64.7
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 3.8e-174 615.5 514 66.5
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 2.6e-167 592.8 506 62.5
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 2.5e-165 586.3 540 59.8
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 9.3e-165 584.3 498 67.9
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 9.3e-165 584.3 536 61.6
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 3.5e-164 582.4 484 66.7
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.9e-162 576.6 520 61.5
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.9e-162 576.6 539 59.2
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 3.7e-161 572.4 542 58.7
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 2.4e-160 569.7 536 60.6
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 5.9e-159 565.1 527 60.0
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.0e-158 564.3 543 59.7
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.9e-158 562.8 520 60.6
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 6.5e-158 561.6 519 60.1
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 4.2e-157 558.9 537 58.5
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 1.2e-156 557.4 527 59.4
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.6e-156 557.0 501 60.9
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 8.7e-155 551.2 554 57.9
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.3e-154 549.3 554 57.6
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 3.3e-154 549.3 533 58.7
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 7.4e-154 548.1 539 58.8
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.3e-153 547.4 540 56.5
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 8.2e-153 544.7 527 57.5
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.1e-152 544.3 534 57.3
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.4e-152 543.9 534 57.9
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 3.8e-150 535.8 503 59.8
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 5.0e-150 535.4 514 58.2
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 7.2e-149 531.6 534 56.9
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.6e-148 528.9 405 73.3
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.0e-147 527.7 515 57.7
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 4.3e-146 522.3 540 55.7
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 3.7e-145 519.2 577 52.9
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 9.1e-144 514.6 508 55.7
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.4e-143 512.7 493 58.4
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.5e-143 512.3 523 55.4
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 6.5e-142 508.4 526 55.7
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.6e-140 503.8 523 54.7
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.4e-139 500.7 483 57.6
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 3.0e-139 499.6 533 54.0
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 3.0e-139 499.6 501 55.5
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 3.9e-139 499.2 534 52.4
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.5e-138 497.3 529 52.4
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 7.4e-138 495.0 514 55.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 7.4e-138 495.0 514 55.4
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.7e-137 493.8 522 52.9
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.8e-137 493.0 532 55.1
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 1.4e-136 490.7 498 54.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 2.4e-136 490.0 503 54.3
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 4.1e-136 489.2 529 53.3
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 9.1e-136 488.0 511 53.8
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 2.6e-135 486.5 539 53.8
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.7e-134 483.8 503 54.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.7e-134 483.8 596 49.3
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.1e-133 481.1 396 62.6
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 7.2e-133 478.4 515 53.6
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.6e-132 477.2 568 51.2
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.5e-130 470.7 533 52.2
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.5e-130 470.7 542 51.3
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.6e-130 469.9 516 50.4
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 9.7e-130 468.0 508 52.2
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 4.1e-128 462.6 410 65.9
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 4.1e-128 462.6 534 51.1
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 7.0e-128 461.8 525 49.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.3e-126 457.6 482 54.8
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 2.2e-126 456.8 508 50.6
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.9e-126 456.4 524 52.3
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 9.4e-125 451.4 504 52.0
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.6e-124 450.7 531 50.3
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 2.1e-124 450.3 530 50.6
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 4.7e-124 449.1 525 51.2
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 3.0e-123 446.4 511 52.8
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.3e-121 441.0 537 51.2
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 6.3e-121 438.7 491 50.5
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 5.4e-120 435.6 503 50.3
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.6e-119 434.1 541 49.7
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 2.7e-119 433.3 542 49.6
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 5.9e-119 432.2 525 48.2
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.5e-118 428.7 459 55.8
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 5.5e-117 425.6 587 46.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 9.4e-117 424.9 498 50.8
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.2e-113 413.7 557 47.8
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.4e-112 410.2 463 51.4
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 3.5e-111 406.4 375 59.7
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 7.7e-111 405.2 355 63.1
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.8e-104 384.0 521 44.9
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 4.0e-99 366.3 432 49.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 2.3e-91 340.5 584 39.7
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.1e-83 313.5 384 47.7
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.4e-80 303.9 466 44.2
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 7.8e-79 298.9 539 40.3
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.3e-78 297.4 528 38.3
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 3.3e-77 293.5 528 37.9
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.4e-72 276.2 203 69.5
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 7.1e-72 275.8 512 37.9
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 1.2e-66 258.5 542 35.1
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 2.0e-66 257.7 382 40.8
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.3e-61 240.0 372 40.1
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 5.6e-61 239.6 408 37.3
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.0e-54 218.8 183 63.4
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 4.3e-53 213.4 206 64.6
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 5.6e-53 213.0 408 33.6
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 8.1e-52 209.1 216 55.1
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.2e-50 205.3 195 55.9
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.9e-40 171.4 166 57.2
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.5e-37 161.8 225 44.9
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 9.4e-32 142.5 152 56.6
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 3.0e-30 137.5 196 47.4
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.4e-27 127.9 229 37.1
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.2e-23 115.5 482 25.9
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 7.0e-19 99.8 165 42.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.0e-17 95.9 88 58.0
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 8.2e-12 76.3 100 44.0
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 9.1e-11 72.8 130 36.2
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.5e-10 70.9 70 54.3
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.3e-09 68.9 47 68.1
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.9e-09 67.8 52 69.2
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.6e-07 62.0 89 39.3
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 4.7e-07 60.5 118 36.4
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 2.3e-06 58.2 117 33.3


User provided reference genes

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