Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.0e-74 282.3 141 100.0
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 1.3e-60 236.5 139 82.7
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 1.4e-51 206.5 134 76.9
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 2.0e-50 202.6 138 73.9
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 2.0e-50 202.6 138 73.2
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 9.9e-50 200.3 138 73.2
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.8e-49 198.4 138 75.4
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 6.4e-49 197.6 138 73.2
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.1e-48 196.8 138 73.2
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.4e-48 196.4 138 73.9
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 4.2e-48 194.9 141 68.8
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 4.2e-48 194.9 138 70.3
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 9.3e-48 193.7 141 69.5
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 9.3e-48 193.7 138 71.7
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.2e-47 193.4 139 71.9
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.2e-47 193.4 138 70.3
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.6e-47 193.0 138 69.6
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 3.5e-47 191.8 138 69.6
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 7.9e-47 190.7 140 70.0
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.8e-46 189.5 139 69.1
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.8e-46 189.5 138 68.1
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 1.1e-45 186.8 138 70.3
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.1e-45 186.8 141 67.4
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.5e-45 186.4 137 67.9
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 7.4e-45 184.1 146 67.1
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 9.6e-45 183.7 139 66.2
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.3e-44 183.3 138 71.0
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 2.1e-44 182.6 139 68.3
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 4.8e-44 181.4 141 65.2
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 4.8e-44 181.4 140 66.4
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 4.8e-44 181.4 141 65.2
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.8e-43 179.5 138 68.8
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 4.0e-43 178.3 140 65.7
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 6.9e-43 177.6 138 67.4
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 9.0e-43 177.2 138 65.2
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 9.0e-43 177.2 142 66.9
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 9.0e-43 177.2 134 66.4
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.5e-42 176.4 143 64.3
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 1.5e-42 176.4 141 63.1
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 2.0e-42 176.0 141 63.8
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 4.5e-42 174.9 143 64.3
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 4.5e-42 174.9 143 64.3
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 5.8e-42 174.5 148 63.5
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 7.6e-42 174.1 141 63.1
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 7.6e-42 174.1 143 63.6
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 7.6e-42 174.1 143 63.6
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 7.6e-42 174.1 143 63.6
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 7.6e-42 174.1 138 64.5
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 4.9e-41 171.4 142 62.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 1.4e-40 169.9 134 63.4
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.4e-40 169.9 138 62.3
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 1.4e-40 169.9 134 64.2
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.9e-40 169.5 143 60.8
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 2.5e-40 169.1 141 61.7
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.5e-40 169.1 137 61.3
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 3.2e-40 168.7 141 61.0
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 3.2e-40 168.7 138 61.6
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.6e-39 166.4 142 59.2
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.6e-39 166.4 138 61.6
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 2.7e-39 165.6 139 66.9
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.7e-39 165.6 141 62.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 3.5e-39 165.2 140 63.6
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 3.5e-39 165.2 140 64.3
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.6e-39 164.9 138 60.9
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 7.9e-39 164.1 139 61.9
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 3.9e-38 161.8 137 64.2
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.3e-37 158.7 98 79.6
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 3.3e-37 158.7 172 52.9
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 5.7e-37 157.9 134 61.2
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 7.4e-37 157.5 160 54.4
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.7e-36 155.2 95 75.8
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 1.4e-35 153.3 136 61.0
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 2.4e-35 152.5 94 77.7
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 2.4e-35 152.5 140 56.4
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 2.4e-35 152.5 141 56.7
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 2.4e-35 152.5 141 56.7
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 5.3e-35 151.4 141 56.0
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 2.6e-34 149.1 150 54.7
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 5.9e-34 147.9 139 56.1
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 1.3e-33 146.7 112 65.2
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 6.5e-33 144.4 145 51.7
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.1e-32 143.7 141 56.7
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 5.5e-32 141.4 138 55.8
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 3.6e-31 138.7 138 54.3
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.3e-30 136.7 100 67.0
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 3.9e-30 135.2 104 66.3
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.3e-28 130.2 104 64.4
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 4.8e-28 128.3 103 66.0
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 2.6e-26 122.5 105 63.8
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 3.4e-26 122.1 142 48.6
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.9e-25 119.0 143 49.7
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 3.2e-24 115.5 141 46.1
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 3.2e-24 115.5 141 46.1
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 3.6e-23 112.1 104 55.8
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.6e-23 112.1 124 51.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 1.8e-19 99.8 136 44.9
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 9.1e-19 97.4 89 58.4
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 2.0e-18 96.3 127 44.9
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.2e-15 87.0 110 42.7
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 2.7e-15 85.9 84 57.1
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.8e-14 83.2 86 54.7
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 8.8e-14 80.9 107 47.7
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 8.8e-14 80.9 84 52.4
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.9e-08 63.2 128 35.2
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 9.4e-08 60.8 56 58.9
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 5.2e-06 55.1 71 46.5


User provided reference genes

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