Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 0.0e+00 1628.6 864 100.0
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 0.0e+00 1225.3 818 77.1
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 0.0e+00 1132.1 808 70.9
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 0.0e+00 1103.2 868 66.4
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 0.0e+00 1103.2 814 70.0
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 0.0e+00 1097.0 856 66.8
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 0.0e+00 1085.9 811 66.6
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 0.0e+00 1080.5 809 68.4
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 1.2e-311 1073.2 808 67.9
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.0e-310 1068.9 827 67.4
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 2.6e-310 1068.5 867 66.6
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 9.3e-308 1060.1 809 65.6
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 1.0e-306 1056.6 799 67.0
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.4e-302 1041.6 819 68.0
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 6.7e-298 1027.3 792 68.3
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 8.2e-296 1020.4 804 65.8
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.4e-295 1019.6 812 66.9
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 1.2e-294 1016.5 801 66.5
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 1.3e-293 1013.1 865 62.1
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 8.5e-293 1010.4 843 66.5
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 8.5e-293 1010.4 805 65.3
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 9.4e-292 1006.9 805 65.3
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 6.1e-291 1004.2 864 64.1
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 6.7e-290 1000.7 803 64.6
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 2.6e-289 998.8 790 65.9
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 7.4e-289 997.3 823 63.1
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 9.1e-287 990.3 820 64.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 2.2e-285 985.7 799 63.1
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 2.9e-285 985.3 782 67.4
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 1.5e-281 973.0 820 61.2
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 2.0e-278 962.6 816 64.2
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 4.5e-278 961.4 811 61.4
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.2e-277 959.1 891 60.2
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 2.5e-276 955.7 807 63.9
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 3.2e-276 955.3 762 62.7
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 3.2e-276 955.3 814 64.5
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 4.2e-276 954.9 730 65.6
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 9.4e-276 953.7 859 60.5
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 9.4e-276 953.7 784 63.0
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 2.8e-272 942.2 750 63.3
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 8.2e-272 940.6 809 62.8
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.1e-271 940.3 805 61.1
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 3.5e-270 935.3 818 62.1
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 3.5e-270 935.3 583 76.5
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 7.7e-270 934.1 686 70.1
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 1.7e-269 932.9 805 63.7
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 3.8e-269 931.8 812 63.1
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 4.2e-268 928.3 811 62.3
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 5.5e-268 927.9 742 64.2
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 9.4e-268 927.2 753 62.7
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.2e-267 926.8 836 60.5
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.0e-266 922.2 845 60.4
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 4.0e-266 921.8 677 67.4
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 7.5e-265 917.5 822 61.1
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.3e-264 916.8 793 60.4
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.3e-264 916.8 850 59.9
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 8.3e-264 914.1 837 60.3
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 1.1e-263 913.7 832 60.0
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 2.4e-263 912.5 799 62.8
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 3.1e-263 912.1 799 61.7
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.2e-262 910.2 788 60.0
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 2.7e-262 909.1 840 60.1
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 3.5e-262 908.7 840 59.3
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 6.1e-259 897.9 732 64.6
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 2.0e-257 892.9 777 62.9
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 4.4e-257 891.7 799 61.3
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 9.8e-257 890.6 793 58.1
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 2.2e-256 889.4 884 57.9
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 3.1e-255 885.6 866 58.0
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 8.6e-253 877.5 788 61.2
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 4.3e-252 875.2 885 57.4
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.6e-251 873.2 782 57.9
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.8e-247 859.8 591 69.5
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 9.5e-244 847.4 784 59.7
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 8.0e-243 844.3 823 57.2
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 2.3e-242 842.8 746 58.8
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 7.5e-241 837.8 737 58.2
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 2.4e-239 832.8 701 61.2
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 2.7e-238 829.3 758 60.3
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 7.8e-238 827.8 796 57.5
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 3.0e-237 825.9 766 56.8
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.1e-236 823.9 779 58.2
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.6e-235 820.1 793 58.1
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 8.3e-232 807.7 805 57.1
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 7.8e-230 801.2 806 54.3
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 4.3e-228 795.4 611 68.7
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 3.5e-222 775.8 739 57.1
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 3.1e-178 629.8 537 59.4
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 6.3e-171 605.5 450 68.0
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.5e-167 593.6 586 58.9
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.8e-165 587.4 810 46.8
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 4.2e-159 566.2 491 60.7
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.4e-157 561.2 321 77.9
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.3e-155 554.7 460 58.3
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 6.5e-152 542.3 590 47.1
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.7e-137 493.8 572 47.4
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.6e-134 484.6 402 63.7
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.6e-127 459.5 264 76.9
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 8.6e-112 409.1 346 56.1
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 4.9e-107 393.3 422 50.0
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 3.2e-106 390.6 524 50.0
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 9.6e-95 352.4 188 81.9
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 7.6e-92 342.8 345 51.3
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 5.6e-87 326.6 430 49.5
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 4.8e-86 323.6 196 74.0
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 1.6e-73 282.0 310 61.0
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 2.8e-70 271.2 178 67.4
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 2.9e-35 154.8 141 54.6
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-30 139.0 366 30.3
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 4.1e-29 134.4 83 69.9
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 7.0e-21 107.1 181 37.6
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.1e-18 99.8 77 59.7
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 1.4e-16 92.8 252 42.5
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 4.0e-16 91.3 156 46.8
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 4.0e-16 91.3 72 50.0


User provided reference genes

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