Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.2e-39 165.2 86 100.0
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 9.4e-27 123.2 86 80.2
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.2e-23 112.1 84 72.6
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 2.2e-20 102.1 91 67.0
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 1.4e-17 92.8 76 76.3
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 1.1e-14 83.2 79 59.5
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 9.1e-14 80.1 89 61.8
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 9.1e-14 80.1 81 61.7
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 2.7e-13 78.6 65 66.2
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 3.5e-13 78.2 80 61.2
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 1.0e-12 76.6 87 57.5
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 6.6e-12 73.9 72 59.7
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 8.6e-12 73.6 67 64.2
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 1.5e-11 72.8 81 60.5
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.9e-11 72.4 72 59.7
QL08p023218 Quercus lobata HOM05D008128 ORTHO05D010259 2.5e-11 72.0 81 60.5
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 3.3e-11 71.6 96 53.1
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 3.3e-11 71.6 67 61.2
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 5.5e-11 70.9 80 57.5
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 5.5e-11 70.9 86 55.8
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 9.5e-11 70.1 57 63.2
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 1.2e-10 69.7 78 55.1
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 1.2e-10 69.7 77 57.1
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 2.8e-10 68.6 67 58.2
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.8e-10 68.6 86 51.2
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 4.7e-10 67.8 47 78.7
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 6.1e-10 67.4 85 49.4
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 1.0e-09 66.6 85 49.4
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 1.0e-09 66.6 90 48.9
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.4e-09 66.2 85 48.2
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 3.0e-09 65.1 84 48.8
TAR633G0657 Trochodendron aralioides HOM05D008128 ORTHO05D010259 3.0e-09 65.1 74 56.8
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 4.0e-09 64.7 70 54.3
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 5.2e-09 64.3 81 54.3
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 6.8e-09 63.9 84 52.4
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 1.2e-08 63.2 85 50.6
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 1.2e-08 63.2 84 51.2
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 1.5e-08 62.8 67 58.2
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 1.5e-08 62.8 90 46.7
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 2.0e-08 62.4 91 49.5
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 2.6e-08 62.0 84 51.2
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 2.6e-08 62.0 66 60.6
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 4.4e-08 61.2 49 67.3
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 4.4e-08 61.2 85 51.8
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 5.7e-08 60.8 90 47.8
Ciclev10029344m.g Citrus clementina HOM05D008128 ORTHO05D010259 7.5e-08 60.5 55 61.8
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 9.8e-08 60.1 67 55.2
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 9.8e-08 60.1 67 55.2
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 9.8e-08 60.1 74 47.3
QL07p007910 Quercus lobata HOM05D008128 ORTHO05D010259 9.8e-08 60.1 39 82.1
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 1.3e-07 59.7 72 54.2
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 1.3e-07 59.7 90 44.4
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.7e-07 59.3 85 50.6
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 2.2e-07 58.9 84 50.0
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 2.2e-07 58.9 84 50.0
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 2.2e-07 58.9 91 48.4
Sed0019677 Sechium edule HOM05D008128 ORTHO05D010259 2.2e-07 58.9 103 42.7
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 2.8e-07 58.5 84 51.2
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 3.7e-07 58.2 84 50.0
Atru.chr3.3366 Acer truncatum HOM05D008128 ORTHO05D010259 3.1e-06 55.1 74 50.0
FAN21G1942 Fragaria x ananassa HOM05D008128 ORTHO05D010259 4.1e-06 54.7 82 45.1
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 9.2e-06 53.5 97 42.3


User provided reference genes

Program Settings