Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 4.4e-234 814.3 424 100.0
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 5.8e-178 627.9 414 83.8
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.0e-145 520.8 404 69.8
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 2.0e-133 479.9 387 65.4
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.3e-126 456.4 360 65.6
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.1e-125 454.1 418 60.0
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 4.8e-124 448.7 394 61.4
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 1.1e-123 447.6 394 61.4
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 1.5e-120 437.2 371 62.8
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 4.2e-120 435.6 402 58.7
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 2.1e-119 433.3 388 61.1
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 2.7e-119 433.0 404 58.9
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.4e-118 430.6 354 65.3
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 8.8e-118 427.9 414 57.2
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 4.4e-117 425.6 401 58.4
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 2.8e-116 422.9 355 63.1
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.8e-116 422.9 355 63.1
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 8.2e-116 421.4 400 59.2
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.1e-115 419.5 355 62.8
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 7.0e-115 418.3 398 58.0
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 3.5e-114 416.0 399 58.1
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 5.9e-114 415.2 383 58.2
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.3e-113 414.1 371 57.1
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 2.2e-113 413.3 406 56.7
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 2.9e-113 412.9 373 59.2
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 3.8e-113 412.5 398 57.3
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 6.5e-113 411.8 374 58.0
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.5e-112 410.6 393 57.5
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 1.5e-112 410.6 339 64.0
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-112 410.6 369 60.7
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 3.2e-112 409.5 358 61.5
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 4.2e-112 409.1 326 65.0
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.2e-111 407.5 382 57.9
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 1.6e-111 407.1 369 59.1
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 2.1e-111 406.8 361 59.0
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 4.7e-111 405.6 361 58.7
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.1e-111 405.2 334 64.7
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 4.0e-110 402.5 412 54.6
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 4.0e-110 402.5 399 55.1
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 4.0e-110 402.5 375 57.1
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 5.2e-110 402.1 357 60.5
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 5.2e-110 402.1 342 62.3
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-109 400.6 339 63.1
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 2.0e-109 400.2 369 58.0
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.6e-109 399.8 415 54.5
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 4.4e-109 399.1 342 61.7
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 4.4e-109 399.1 380 57.6
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 7.5e-109 398.3 363 57.3
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 9.8e-109 397.9 369 58.0
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 9.8e-109 397.9 377 57.3
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 9.8e-109 397.9 366 58.7
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.8e-108 396.4 367 57.5
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 2.8e-108 396.4 367 57.5
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 3.7e-108 396.0 415 54.9
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 6.3e-108 395.2 393 54.7
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 6.3e-108 395.2 393 55.2
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 1.1e-107 394.4 358 58.1
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 1.1e-107 394.4 372 56.5
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 1.1e-107 394.4 372 56.5
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 3.1e-107 392.9 374 56.4
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 3.5e-106 389.4 366 56.8
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 1.3e-105 387.5 422 51.9
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 2.9e-105 386.3 398 53.8
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.9e-105 386.3 394 53.6
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 8.6e-105 384.8 414 54.1
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 1.1e-104 384.4 362 58.0
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 2.5e-104 383.3 362 56.6
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 5.5e-104 382.1 367 56.7
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 1.6e-103 380.6 340 57.4
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 1.6e-103 380.6 486 49.2
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 6.1e-103 378.6 376 56.1
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 1.8e-102 377.1 349 59.0
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 1.8e-102 377.1 371 54.4
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 3.4e-101 372.9 417 50.8
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 3.4e-101 372.9 347 55.9
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.7e-100 370.5 416 52.9
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 2.8e-100 369.8 412 50.5
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 4.9e-100 369.0 361 54.6
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 6.3e-100 368.6 334 58.7
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 6.3e-100 368.6 365 55.1
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 2.0e-98 363.6 360 54.4
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-91 340.9 317 58.7
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 7.0e-91 338.6 413 48.2
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 7.8e-90 335.1 354 52.5
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.2e-85 321.2 278 60.4
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 6.4e-84 315.5 302 56.3
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 5.4e-83 312.4 401 45.4
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 6.6e-81 305.4 421 44.2
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 4.4e-77 292.7 250 62.0
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 2.9e-76 290.0 243 69.1
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.0e-73 281.6 370 44.9
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 4.3e-72 276.2 364 44.8
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 4.3e-72 276.2 487 39.6
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 6.2e-71 272.3 271 57.9
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 8.4e-68 261.9 228 59.6
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 3.5e-66 256.5 353 42.8
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 1.6e-63 247.7 258 53.5
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 2.1e-63 247.3 261 48.7
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 6.2e-63 245.7 218 61.9
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 3.1e-62 243.4 338 44.1
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 1.5e-61 241.1 178 71.9
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 2.6e-61 240.4 238 55.0
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 5.8e-61 239.2 215 56.7
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 1.3e-60 238.0 274 52.9
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 1.3e-60 238.0 236 55.9
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 7.1e-59 232.3 245 54.7
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 2.1e-55 220.7 331 39.9
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 1.1e-54 218.4 139 79.9
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 5.8e-53 212.6 436 36.5
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 2.3e-49 200.7 349 37.8
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 3.9e-49 199.9 238 52.1
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.5e-48 198.0 128 82.0
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 8.1e-47 192.2 222 48.6
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.9e-43 181.0 365 35.3
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-41 174.5 237 42.6
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 4.3e-40 169.9 224 47.3
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 7.4e-40 169.1 229 45.4
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 2.4e-38 164.1 336 33.0
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 2.2e-36 157.5 161 52.8
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 2.2e-36 157.5 124 63.7
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 2.9e-36 157.1 96 80.2
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 2.1e-34 151.0 137 55.5
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.4e-30 138.3 330 33.3
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 6.9e-30 136.0 340 28.5
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.1e-27 128.6 333 27.9
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 7.9e-26 122.5 105 61.0
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.3e-24 116.7 361 26.6
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 5.7e-24 116.3 96 61.5
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 7.4e-24 115.9 107 61.7
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 9.7e-24 115.5 379 27.7
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.8e-23 114.0 82 74.4
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 3.1e-22 110.5 84 67.9
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.9e-22 109.4 121 52.9
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.9e-21 106.3 94 59.6
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 5.9e-21 106.3 124 44.4
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 3.8e-20 103.6 98 58.2
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 3.8e-20 103.6 83 75.9
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 6.5e-20 102.8 75 72.0
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.5e-19 100.9 107 47.7
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 2.7e-18 97.4 114 50.9
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 4.7e-18 96.7 139 41.0
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 6.1e-18 96.3 145 43.4
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 2.0e-16 91.3 139 42.4
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 3.1e-14 84.0 65 63.1
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 4.1e-14 83.6 63 63.5
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 4.1e-14 83.6 73 58.9
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 9.1e-14 82.4 58 77.6
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 7.2e-11 72.8 70 50.0
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.7e-10 70.1 45 71.1
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 6.7e-09 66.2 67 49.3
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 2.4e-06 57.8 222 27.9


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