Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.3e-213 745.3 389 100.0
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 7.7e-177 624.0 414 83.8
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.4e-114 417.2 405 60.5
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 6.0e-105 385.2 395 57.0
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 3.4e-100 369.4 369 58.3
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 8.4e-99 364.8 405 54.8
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 7.1e-98 361.7 403 54.3
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.2e-97 360.9 401 55.9
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 1.5e-95 354.0 380 56.1
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 1.9e-95 353.6 396 53.8
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 5.6e-95 352.1 408 52.7
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 5.6e-95 352.1 417 52.3
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 9.6e-95 351.3 382 56.3
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.8e-93 347.1 347 59.1
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 2.9e-91 339.7 408 52.0
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.5e-90 336.7 368 56.2
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 3.2e-90 336.3 360 56.9
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.2e-90 336.3 360 56.9
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 4.2e-90 335.9 409 51.3
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 7.1e-90 335.1 406 50.7
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 2.7e-89 333.2 408 52.2
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.5e-89 332.8 360 56.7
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 4.6e-89 332.4 392 52.6
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 3.0e-88 329.7 394 49.0
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 8.7e-88 328.2 383 51.2
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 1.1e-87 327.8 384 53.6
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.5e-87 327.4 404 50.2
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 2.5e-87 326.6 404 49.8
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 5.7e-87 325.5 378 53.4
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.6e-86 323.9 403 49.4
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 1.6e-86 323.9 363 53.2
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.1e-86 323.6 413 50.4
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 6.2e-86 322.0 400 49.5
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 8.2e-86 321.6 394 50.8
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 1.1e-85 321.2 381 51.2
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 1.4e-85 320.9 350 54.6
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 3.1e-85 319.7 370 51.9
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.1e-85 319.3 344 57.0
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.2e-84 317.8 350 54.0
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 1.5e-84 317.4 384 49.7
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 2.0e-84 317.0 369 50.1
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 5.8e-84 315.5 385 49.4
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 7.6e-84 315.1 372 50.8
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 7.6e-84 315.1 402 47.8
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 7.6e-84 315.1 385 50.4
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 7.6e-84 315.1 397 49.1
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 1.3e-83 314.3 356 52.5
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.3e-83 314.3 373 51.5
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.2e-83 313.5 376 51.1
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 2.2e-83 313.5 376 51.1
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.2e-83 313.5 344 56.7
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 2.9e-83 313.2 383 50.4
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 8.4e-83 311.6 381 50.1
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 8.4e-83 311.6 381 50.1
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 1.1e-82 311.2 375 50.7
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 1.4e-82 310.8 486 44.2
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 1.9e-82 310.5 378 50.8
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 2.5e-82 310.1 371 50.1
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 3.2e-82 309.7 366 51.9
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 5.5e-82 308.9 407 47.9
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 5.5e-82 308.9 378 50.5
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 1.2e-81 307.8 396 47.7
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 2.1e-81 307.0 402 46.8
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 4.6e-81 305.8 391 49.6
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.3e-80 304.3 405 46.7
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.3e-80 303.5 362 51.4
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 3.0e-80 303.1 358 52.2
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 1.5e-79 300.8 376 49.7
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 5.7e-79 298.9 375 49.3
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.4e-79 298.5 416 47.8
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 4.8e-78 295.8 380 47.4
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 6.3e-78 295.4 338 52.1
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 6.3e-78 295.4 387 50.1
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 1.4e-77 294.3 371 48.2
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 2.4e-77 293.5 367 49.0
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.0e-75 288.1 371 47.4
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 2.2e-75 287.0 366 47.3
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 6.5e-75 285.4 355 47.3
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 8.5e-75 285.0 373 47.5
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.9e-74 283.9 370 47.3
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 5.5e-74 282.3 413 45.5
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 3.0e-72 276.6 369 46.3
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.1e-69 268.1 276 55.1
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 5.9e-68 262.3 239 66.5
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 6.5e-67 258.8 286 53.1
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 3.6e-65 253.1 348 46.3
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-65 252.7 326 49.1
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 3.1e-61 240.0 256 55.9
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 2.2e-59 233.8 422 38.6
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.5e-58 231.1 360 42.8
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 2.7e-57 226.9 395 39.7
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 2.6e-55 220.3 255 52.5
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 2.4e-53 213.8 485 36.1
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 7.0e-53 212.2 361 39.1
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 7.0e-53 212.2 217 59.4
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 3.8e-51 206.5 217 55.8
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 4.2e-50 203.0 212 57.1
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 5.5e-50 202.6 228 53.1
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 3.6e-49 199.9 236 53.4
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 1.4e-48 198.0 245 51.0
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 5.2e-48 196.1 323 41.2
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 5.2e-48 196.1 267 48.3
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 1.8e-45 187.6 220 50.5
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 2.7e-44 183.7 167 64.7
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.9e-43 180.3 361 37.7
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 1.5e-42 177.9 431 35.5
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 5.5e-42 176.0 139 69.1
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 4.7e-41 172.9 252 43.3
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 1.5e-39 167.9 337 36.8
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.3e-38 164.9 224 47.3
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 7.0e-37 159.1 246 45.5
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 7.7e-36 155.6 128 69.5
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.1e-34 151.8 310 36.1
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 8.0e-33 145.6 220 42.7
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 1.8e-29 134.4 237 39.2
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 5.0e-27 126.3 295 33.9
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 5.0e-27 126.3 338 32.2
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 8.6e-27 125.6 124 54.8
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-26 124.0 245 35.1
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 2.8e-25 120.6 164 47.6
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.8e-24 115.9 83 75.9
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 2.0e-23 114.4 140 45.0
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 9.2e-21 105.5 270 34.1
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 3.5e-20 103.6 97 61.9
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.5e-20 103.6 132 50.0
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 7.8e-20 102.4 67 86.6
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 2.3e-19 100.9 84 65.5
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 3.3e-18 97.1 85 57.6
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 2.8e-17 94.0 275 27.6
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 4.7e-17 93.2 105 55.2
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 1.4e-16 91.7 125 48.0
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 6.8e-16 89.4 272 27.6
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.8e-15 86.3 113 46.9
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 9.8e-15 85.5 86 55.8
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 2.2e-14 84.3 79 59.5
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 2.2e-14 84.3 105 49.5
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 4.1e-13 80.1 58 75.9
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.2e-12 78.6 292 26.4
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 7.8e-12 75.9 308 26.0
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.9e-10 71.2 128 37.5
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-09 68.6 45 68.9
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 8.1e-09 65.9 140 34.3
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.5e-07 61.6 87 46.0
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.6e-07 60.8 107 40.2
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 5.8e-07 59.7 131 35.9
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 1.7e-06 58.2 138 34.8
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 2.9e-06 57.4 59 54.2
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 3.7e-06 57.0 54 55.6
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 6.4e-06 56.2 53 50.9


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