Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 2.0e-80 302.4 151 100.0
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.7e-68 262.7 151 86.1
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.5e-67 259.6 151 84.1
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 7.6e-64 247.3 151 80.8
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.3e-63 246.5 150 78.7
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.3e-63 246.5 152 81.6
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 8.4e-63 243.8 151 78.8
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 3.2e-62 241.9 150 78.7
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 1.2e-61 240.0 151 78.1
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.6e-61 239.6 151 78.1
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 2.7e-61 238.8 151 77.5
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.8e-60 236.1 151 78.8
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.3e-60 235.7 150 76.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 6.7e-60 234.2 150 76.7
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 8.7e-60 233.8 151 76.8
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 2.5e-59 232.3 153 78.4
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 4.3e-59 231.5 149 77.2
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 5.6e-59 231.1 151 77.5
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.3e-58 229.9 150 74.7
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 1.3e-58 229.9 151 76.2
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.6e-58 229.6 150 76.0
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.6e-58 229.6 150 76.0
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.6e-58 229.6 150 79.3
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 2.1e-58 229.2 152 78.3
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 2.8e-58 228.8 150 78.0
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 3.6e-58 228.4 150 75.3
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 4.8e-58 228.0 150 76.0
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 4.8e-58 228.0 151 77.5
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 6.2e-58 227.6 150 75.3
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 6.2e-58 227.6 150 75.3
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 6.2e-58 227.6 150 75.3
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 8.1e-58 227.3 150 77.3
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 8.1e-58 227.3 147 76.2
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 8.1e-58 227.3 150 75.3
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 1.1e-57 226.9 150 75.3
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 1.1e-57 226.9 150 75.3
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.1e-57 226.9 150 74.7
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 4.0e-57 224.9 150 74.0
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 6.9e-57 224.2 151 74.2
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 6.9e-57 224.2 152 75.0
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.0e-57 223.8 150 73.3
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.2e-56 223.4 150 74.0
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.5e-56 223.0 151 73.5
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.5e-56 223.0 151 73.5
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 1.5e-56 223.0 151 74.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 2.6e-56 222.2 151 74.8
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 3.4e-56 221.9 151 73.5
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 5.8e-56 221.1 150 74.7
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 5.8e-56 221.1 150 74.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.8e-56 221.1 151 73.5
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 7.6e-56 220.7 150 72.7
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 7.6e-56 220.7 150 73.3
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 9.9e-56 220.3 151 72.8
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 2.2e-55 219.2 145 76.6
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.9e-55 218.8 151 72.8
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 3.8e-55 218.4 144 75.0
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 4.9e-55 218.0 145 75.2
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 4.9e-55 218.0 151 72.8
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 6.4e-55 217.6 152 73.7
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 3.2e-54 215.3 146 72.6
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 4.2e-54 214.9 144 74.3
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 7.1e-54 214.2 154 76.0
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 9.3e-54 213.8 145 71.7
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 9.3e-54 213.8 145 74.5
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 9.3e-54 213.8 145 74.5
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.6e-53 213.0 151 69.5
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.6e-53 213.0 152 73.0
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 3.5e-53 211.8 151 70.2
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 4.6e-53 211.5 147 71.4
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 4.6e-53 211.5 139 74.1
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 4.6e-53 211.5 151 70.9
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 4.6e-53 211.5 145 73.1
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 6.0e-53 211.1 117 83.8
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.0e-52 210.3 153 70.6
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.0e-52 210.3 151 70.9
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.3e-52 209.9 147 70.7
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.3e-52 209.9 153 70.6
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 1.8e-52 209.5 176 64.2
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.8e-52 209.5 152 71.1
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 2.3e-52 209.1 146 71.9
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 2.3e-52 209.1 131 77.9
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.0e-52 208.8 153 69.9
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 3.0e-52 208.8 151 69.5
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 6.7e-52 207.6 151 68.9
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 8.7e-52 207.2 153 69.3
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 8.7e-52 207.2 146 71.2
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.1e-51 206.8 153 69.9
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.5e-51 206.5 152 70.4
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.5e-51 206.5 151 70.2
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 3.3e-51 205.3 115 80.9
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 9.6e-51 203.8 135 74.1
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 2.1e-50 202.6 116 78.4
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 6.2e-50 201.1 139 72.7
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.4e-49 199.9 150 67.3
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 2.4e-49 199.1 116 79.3
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.1e-49 198.7 147 68.0
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 9.0e-49 197.2 149 66.4
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 1.5e-48 196.4 153 66.7
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 2.6e-48 195.7 153 68.6
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 3.4e-48 195.3 145 66.9
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.5e-46 189.1 147 66.7
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.2e-45 186.8 114 76.3
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.8e-44 183.0 140 62.9
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.5e-43 179.9 149 66.4
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.3e-43 178.7 121 77.7
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 5.7e-43 177.9 152 62.5
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 7.4e-43 177.6 116 79.3
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 6.9e-41 171.0 148 60.8
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 6.9e-41 171.0 96 78.1
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.5e-40 169.9 150 58.0
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.6e-40 169.1 152 58.6
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 3.4e-40 168.7 86 86.0
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 3.4e-40 168.7 140 61.4
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 4.5e-40 168.3 118 73.7
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 7.2e-38 161.0 122 69.7
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 6.1e-37 157.9 84 83.3
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 1.0e-36 157.1 90 77.8
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 6.3e-34 147.9 118 62.7
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.3e-31 140.2 119 64.7
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 3.8e-31 138.7 121 65.3
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 5.0e-31 138.3 122 65.6
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 4.2e-30 135.2 116 67.2
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 6.1e-29 131.3 120 62.5
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 3.9e-28 128.6 89 67.4
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 6.7e-28 127.9 92 75.0
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 4.4e-27 125.2 150 51.3
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.3e-23 113.6 94 63.8
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 8.8e-20 100.9 136 44.9
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 1.6e-16 90.1 136 38.2
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.2e-14 81.3 74 62.2
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 7.2e-14 81.3 159 38.4
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 5.2e-12 75.1 88 53.4
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 5.7e-11 71.6 80 61.2
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 9.7e-11 70.9 80 61.2


User provided reference genes

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