Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 5.1e-54 214.2 108 100.0
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 3.1e-27 125.2 108 62.0
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 4.5e-26 121.3 105 61.9
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 9.4e-24 113.6 85 64.7
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 9.1e-19 97.1 124 49.2
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 3.8e-17 91.7 80 62.5
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 1.9e-16 89.4 108 50.0
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 3.2e-16 88.6 108 50.0
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 9.4e-16 87.0 108 50.0
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 1.2e-15 86.7 108 49.1
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 3.6e-15 85.1 108 47.2
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 4.7e-15 84.7 115 46.1
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.0e-14 83.6 108 42.6
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 1.8e-14 82.8 98 46.9
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.1e-13 80.1 108 42.6
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 9.7e-13 77.0 105 44.8
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 2.2e-12 75.9 113 47.8
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 2.8e-12 75.5 105 43.8
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 4.8e-12 74.7 106 43.4
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 6.3e-12 74.3 94 50.0
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 1.1e-11 73.6 110 44.5
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.8e-11 72.8 110 44.5
RcHm_v2.0_Chr3g0470211 Rosa chinensis HOM05D022265 ORTHO05D010490 3.1e-11 72.0 111 43.2
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 4.1e-11 71.6 85 51.8
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 4.1e-11 71.6 108 48.1
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 2.0e-10 69.3 107 38.3
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 2.0e-10 69.3 107 38.3
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 3.5e-10 68.6 100 44.0
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 5.9e-10 67.8 108 40.7
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 5.9e-10 67.8 82 45.1
FAN02G1308 Fragaria x ananassa HOM05D022265 ORTHO05D010490 7.7e-10 67.4 112 39.3
Psat5g259960 Pisum sativum HOM05D008514 ORTHO05D010490 1.0e-09 67.0 99 44.4
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 1.0e-09 67.0 80 50.0
FvH4_6g16343 Fragaria vesca HOM05D022265 ORTHO05D010490 5.0e-09 64.7 114 37.7
VMungo0507G0001 Vigna mungo HOM05D008514 ORTHO05D010490 8.5e-09 63.9 107 39.3
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.1e-08 63.5 103 41.7
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 1.1e-08 63.5 120 40.8
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 1.9e-08 62.8 100 42.0
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 1.9e-08 62.8 105 42.9
CsaV3_1G015250 Cucumis sativus L. HOM05D029204 ORTHO05D010490 4.2e-08 61.6 112 38.4
FAN09G3467 Fragaria x ananassa HOM05D022265 ORTHO05D010490 5.5e-08 61.2 81 44.4
Hma1.2p1_0101F.1_g049390 Hydrangea macrophylla HOM05D008514 ORTHO05D010490 1.6e-07 59.7 37 67.6
Peaxi162Scf00429g00081 Petunia axillaris HOM05D008514 ORTHO05D010490 1.6e-07 59.7 83 42.2
Nitab4.5_0003419g0020 Nicotiana tabacum HOM05D008514 ORTHO05D010490 2.7e-07 58.9 77 45.5
FAN05G4022 Fragaria x ananassa HOM05D022265 ORTHO05D010490 4.7e-07 58.2 81 43.2
Manes.11G165600 Manihot esculenta HOM05D008514 ORTHO05D010490 6.1e-07 57.8 108 38.0
Migut.D02369 Erythranthe guttata HOM05D039154 ORTHO05D010490 1.8e-06 56.2 29 79.3
Sed0021652 Sechium edule HOM05D029204 ORTHO05D010490 1.8e-06 56.2 80 45.0
Nitab4.5_0008285g0040 Nicotiana tabacum HOM05D008514 ORTHO05D010490 2.3e-06 55.8 35 65.7
ClCG01G011530 Citrullus lanatus HOM05D029204 ORTHO05D010490 6.7e-06 54.3 41 68.3
Solyc11g071380.1 Solanum lycopersicum HOM05D008514 ORTHO05D010490 8.8e-06 53.9 30 73.3
Sopen11g029060 Solanum pennellii HOM05D008514 ORTHO05D010490 8.8e-06 53.9 30 73.3
PGSC0003DMG400046267 Solanum tuberosum HOM05D008514 ORTHO05D010490 8.8e-06 53.9 30 73.3


User provided reference genes

Program Settings