Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G083600 Carya illinoinensis HOM05D000067 ORTHO05D014911 6.7e-75 283.9 139 100.0
CiPaw.14G073300 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.5e-42 176.4 104 80.8
CiPaw.12G011100 Carya illinoinensis HOM05D000067 ORTHO05D000280 5.6e-37 157.9 113 70.8
CiPaw.15G117300 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.3e-30 136.7 116 62.9
CiPaw.14G084800 Carya illinoinensis HOM05D000067 ORTHO05D000280 8.1e-28 127.5 68 89.7
CiPaw.15G117400 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.1e-27 127.1 110 60.9
CiPaw.14G083700 Carya illinoinensis HOM05D000067 ORTHO05D000280 5.2e-27 124.8 68 88.2
CiPaw.09G127500 Carya illinoinensis HOM05D000067 ORTHO05D000280 9.2e-24 114.0 111 56.8
CiPaw.05G183900 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.2e-23 113.6 111 55.9
CiPaw.08G159000 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.2e-23 113.6 110 56.4
CiPaw.05G237600 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.5e-18 96.7 68 67.6
Cfa015157 Carpinus fangiana HOM05D000067 ORTHO05D000280 4.9e-17 91.7 107 44.9
Cfa015880 Carpinus fangiana HOM05D000067 ORTHO05D000280 1.2e-15 87.0 79 58.2
CiPaw.05G237800 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.6e-15 86.7 63 63.5
Cfa015890 Carpinus fangiana HOM05D000067 ORTHO05D000280 3.5e-15 85.5 79 58.2
CiPaw.05G235300 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.7e-14 83.2 66 65.2
Haze_00603 Corylus avellana HOM05D000067 ORTHO05D000280 1.7e-14 83.2 89 52.8
Cfa015883 Carpinus fangiana HOM05D000067 ORTHO05D000280 2.3e-14 82.8 91 53.8
Cfa015885 Carpinus fangiana HOM05D000067 ORTHO05D000280 2.3e-14 82.8 107 49.5
Cfa015887 Carpinus fangiana HOM05D000067 ORTHO05D000280 2.3e-14 82.8 91 54.9
Cfa015882 Carpinus fangiana HOM05D000067 ORTHO05D000280 6.6e-14 81.3 109 48.6
Cfa015891 Carpinus fangiana HOM05D000067 ORTHO05D000280 6.6e-14 81.3 80 52.5
CiPaw.05G238400 Carya illinoinensis HOM05D000067 ORTHO05D000280 6.6e-14 81.3 84 51.2
Haze_00605 Corylus avellana HOM05D000067 ORTHO05D000280 6.6e-14 81.3 58 69.0
Haze_00600 Corylus avellana HOM05D000067 ORTHO05D000280 1.1e-13 80.5 107 47.7
Gorai.006G035700 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.5e-13 80.1 74 52.7
CiPaw.05G238000 Carya illinoinensis HOM05D000067 ORTHO05D000280 9.6e-13 77.4 100 47.0
Gohir.D09G030800 Gossypium hirsutum HOM05D000067 ORTHO05D000280 9.6e-13 77.4 65 56.9
QL09p025712 Quercus lobata HOM05D000067 ORTHO05D000280 9.6e-13 77.4 124 38.7
Cfa015888 Carpinus fangiana HOM05D000067 ORTHO05D000280 1.3e-12 77.0 94 43.6
Duzib187G0140 Durio zibethinus HOM05D000067 ORTHO05D000280 2.1e-12 76.3 69 58.0
Duzib187G1054 Durio zibethinus HOM05D000067 ORTHO05D000280 2.1e-12 76.3 69 58.0
CiPaw.08G146400 Carya illinoinensis HOM05D000067 ORTHO05D000280 2.8e-12 75.9 115 41.7
QL09p025684 Quercus lobata HOM05D000067 ORTHO05D000280 6.2e-12 74.7 65 55.4
Haze_00599 Corylus avellana HOM05D000067 ORTHO05D000280 8.1e-12 74.3 82 52.4
Duzib147G0494 Durio zibethinus HOM05D000067 ORTHO05D000280 1.1e-11 73.9 65 55.4
Gohir.D09G030700 Gossypium hirsutum HOM05D000067 ORTHO05D000280 1.1e-11 73.9 65 55.4
Gorai.006G035400 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.1e-11 73.9 65 55.4
CiPaw.05G238100 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.4e-11 73.6 94 45.7
CiPaw.05G238300 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.4e-11 73.6 94 45.7
Gohir.A09G030700 Gossypium hirsutum HOM05D000067 ORTHO05D000280 1.4e-11 73.6 65 55.4
Duzib187G1103 Durio zibethinus HOM05D000067 ORTHO05D000280 1.8e-11 73.2 69 55.1
QL09p025724 Quercus lobata HOM05D000067 ORTHO05D000280 4.0e-11 72.0 112 39.3
QL09p023946 Quercus lobata HOM05D000067 ORTHO05D000280 1.2e-10 70.5 72 51.4
COL.COLO4_22401 Corchorus olitorius HOM05D000067 ORTHO05D000280 1.5e-10 70.1 73 50.7
QL09p026548 Quercus lobata HOM05D000067 ORTHO05D000280 1.5e-10 70.1 66 54.5
QL09p024956 Quercus lobata HOM05D000067 ORTHO05D000280 2.0e-10 69.7 59 55.9
vmacro07915 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 3.4e-10 68.9 127 31.5
QL09p025393 Quercus lobata HOM05D000067 ORTHO05D000280 4.4e-10 68.6 66 53.0
QL09p025429 Quercus lobata HOM05D000067 ORTHO05D000280 4.4e-10 68.6 66 53.0
QL09p026477 Quercus lobata HOM05D000067 ORTHO05D000280 4.4e-10 68.6 66 53.0
QL09p026531 Quercus lobata HOM05D000067 ORTHO05D000280 4.4e-10 68.6 66 53.0
QL09p042638 Quercus lobata HOM05D000067 ORTHO05D000280 4.4e-10 68.6 73 50.7
vmacro07921 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 5.8e-10 68.2 131 35.9
vmacro07917 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 7.6e-10 67.8 80 43.8
Hma1.2p1_1623F.1_g294170 Hydrangea macrophylla HOM05D000067 ORTHO05D000280 9.9e-10 67.4 81 42.0
CiPaw.08G145900 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.3e-09 67.0 74 44.6
QL04p002997 Quercus lobata HOM05D000067 ORTHO05D000280 1.3e-09 67.0 64 48.4
Gohir.A10G231600 Gossypium hirsutum HOM05D000067 ORTHO05D000280 3.8e-09 65.5 61 49.2
CiPaw.09G127800 Carya illinoinensis HOM05D000067 ORTHO05D000280 4.9e-09 65.1 52 57.7
Gohir.A09G030900 Gossypium hirsutum HOM05D000067 ORTHO05D000280 4.9e-09 65.1 62 46.8
Gohir.A09G008250 Gossypium hirsutum HOM05D000067 ORTHO05D000280 6.4e-09 64.7 105 36.2
Gohir.A10G231250 Gossypium hirsutum HOM05D000067 ORTHO05D000280 6.4e-09 64.7 62 48.4
QL05p030861 Quercus lobata HOM05D000067 ORTHO05D000280 6.4e-09 64.7 59 50.8
QL09p025093 Quercus lobata HOM05D000067 ORTHO05D000280 6.4e-09 64.7 59 50.8
arahy.Tifrunner.gnm1.ann1.Q8JEHC Arachis hypogaea HOM05D000067 ORTHO05D000280 8.4e-09 64.3 74 44.6
Gohir.A04G044650 Gossypium hirsutum HOM05D000067 ORTHO05D000280 8.4e-09 64.3 62 50.0
Gohir.D05G338440 Gossypium hirsutum HOM05D000067 ORTHO05D000280 8.4e-09 64.3 80 42.5
Gohir.D05G338460 Gossypium hirsutum HOM05D000067 ORTHO05D000280 8.4e-09 64.3 80 42.5
Gohir.D09G030900 Gossypium hirsutum HOM05D000067 ORTHO05D000280 8.4e-09 64.3 100 36.0
Gorai.006G035800 Gossypium raimondii HOM05D000067 ORTHO05D000280 8.4e-09 64.3 100 36.0
Gorai.009G363000 Gossypium raimondii HOM05D000067 ORTHO05D000280 8.4e-09 64.3 80 42.5
QL10p024427 Quercus lobata HOM05D000067 ORTHO05D000280 8.4e-09 64.3 76 47.4
QL10p024505 Quercus lobata HOM05D000067 ORTHO05D000280 8.4e-09 64.3 76 47.4
QL10p024581 Quercus lobata HOM05D000067 ORTHO05D000280 8.4e-09 64.3 76 47.4
arahy.Tifrunner.gnm1.ann1.ZJER8L Arachis hypogaea HOM05D000067 ORTHO05D000280 1.1e-08 63.9 74 44.6
Gorai.006G036100 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.4e-08 63.5 62 45.2
Hma1.2p1_2068F.1_g313080 Hydrangea macrophylla HOM05D000067 ORTHO05D000280 1.4e-08 63.5 81 40.7
Gohir.A09G030601 Gossypium hirsutum HOM05D000067 ORTHO05D000280 1.9e-08 63.2 76 44.7
Gohir.D09G031000 Gossypium hirsutum HOM05D000067 ORTHO05D000280 1.9e-08 63.2 62 45.2
Manes.12G148600 Manihot esculenta HOM05D000067 ORTHO05D000280 1.9e-08 63.2 60 48.3
Rhsim03G0006700 Rhododendron simsii HOM05D000067 ORTHO05D000280 2.4e-08 62.8 120 34.2
arahy.Tifrunner.gnm1.ann1.F7D8SE Arachis hypogaea HOM05D000067 ORTHO05D000280 3.2e-08 62.4 68 48.5
CSS0047736 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 3.2e-08 62.4 131 32.8
arahy.Tifrunner.gnm1.ann1.R1BU5M Arachis hypogaea HOM05D000067 ORTHO05D000280 5.4e-08 61.6 68 48.5
Gorai.009G363100 Gossypium raimondii HOM05D000067 ORTHO05D000280 5.4e-08 61.6 55 56.4
TWI79G1041 Tripterygium wilfordii HOM05D000067 ORTHO05D000280 5.4e-08 61.6 55 50.9
vmacro07845 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 5.4e-08 61.6 64 48.4
CSS0044956 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 7.1e-08 61.2 80 38.8
Duzib264G0785 Durio zibethinus HOM05D000067 ORTHO05D000280 7.1e-08 61.2 57 52.6
Oeu042986.1 Olea europaea HOM05D000067 ORTHO05D000280 7.1e-08 61.2 113 33.6
Rhsim03G0006800 Rhododendron simsii HOM05D000067 ORTHO05D001311 7.1e-08 61.2 65 46.2
vmacro07919 Vaccinium macrocarpon HOM05D000067 ORTHO05D014911 7.1e-08 61.2 84 41.7
COL.COLO4_02890 Corchorus olitorius HOM05D000067 ORTHO05D000280 9.3e-08 60.8 79 41.8
Gorai.009G363300 Gossypium raimondii HOM05D000067 ORTHO05D000280 9.3e-08 60.8 59 49.2
Lj3g0004619 Lotus japonicus HOM05D000067 ORTHO05D000280 9.3e-08 60.8 64 48.4
Oeu025081.1 Olea europaea HOM05D000067 ORTHO05D000280 9.3e-08 60.8 75 40.0
Thecc.01G120100 Theobroma cacao HOM05D000067 ORTHO05D000280 9.3e-08 60.8 65 46.2
TWI15G0083 Tripterygium wilfordii HOM05D000067 ORTHO05D000280 9.3e-08 60.8 55 47.3
TWI15G0110 Tripterygium wilfordii HOM05D000067 ORTHO05D000280 9.3e-08 60.8 55 47.3
CANSAT21G2579 Cannabis sativa HOM05D000067 ORTHO05D000280 1.2e-07 60.5 64 43.8
Gohir.D05G338420 Gossypium hirsutum HOM05D000067 ORTHO05D000280 1.2e-07 60.5 56 51.8
Gorai.009G362900 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.2e-07 60.5 56 51.8
Peaxi162Scf00663g00210 Petunia axillaris HOM05D000067 ORTHO05D000280 1.2e-07 60.5 93 34.4
QL09p024847 Quercus lobata HOM05D000067 ORTHO05D000280 1.2e-07 60.5 59 49.2
Rhsim05G0138100 Rhododendron simsii HOM05D000067 ORTHO05D000280 1.2e-07 60.5 64 48.4
Gorai.006G009100 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.6e-07 60.1 105 34.3
CiPaw.06G019500 Carya illinoinensis HOM05D000067 ORTHO05D000280 2.1e-07 59.7 42 64.3
Manes.12G149100 Manihot esculenta HOM05D000067 ORTHO05D000280 2.1e-07 59.7 71 40.8
GSVIVG01006399001 Vitis vinifera HOM05D000067 ORTHO05D000280 2.1e-07 59.7 53 52.8
GSVIVG01006642001 Vitis vinifera HOM05D000067 ORTHO05D000280 2.1e-07 59.7 53 52.8
CSS0006933 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D014911 2.7e-07 59.3 63 47.6
PSO357G0562 Papaver somniferum HOM05D000067 ORTHO05D000280 2.7e-07 59.3 78 41.0
Dinv16000 Davidia involucrata HOM05D000067 ORTHO05D000280 3.5e-07 58.9 87 40.2
Sabra19G0014000 Salix brachista HOM05D000067 ORTHO05D000280 3.5e-07 58.9 74 41.9
Cpa.g.sc1.288 Carica papaya HOM05D000067 ORTHO05D000280 6.0e-07 58.2 108 34.3
Cpa.g.sc1.290 Carica papaya HOM05D000067 ORTHO05D000280 6.0e-07 58.2 108 34.3
ECA233G2440 Erigeron canadensis HOM05D000067 ORTHO05D000280 6.0e-07 58.2 54 51.9
Gohir.D09G007600 Gossypium hirsutum HOM05D000067 ORTHO05D000280 6.0e-07 58.2 105 33.3
CSS0045875 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 7.9e-07 57.8 66 43.9
Ciclev10018045m.g Citrus clementina HOM05D000067 ORTHO05D000280 7.9e-07 57.8 70 41.4
Lsat_1_v5_gn_2_30961 Lactuca sativa HOM05D000067 ORTHO05D000280 7.9e-07 57.8 78 39.7
CSS0038720 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D014911 1.0e-06 57.4 66 47.0
CANSAT21G2348 Cannabis sativa HOM05D000067 ORTHO05D000280 1.0e-06 57.4 64 40.6
Oeu042985.1 Olea europaea HOM05D000067 ORTHO05D000280 1.0e-06 57.4 75 38.7
Potri.019G023006 Populus trichocarpa HOM05D000067 ORTHO05D000280 1.0e-06 57.4 55 50.9
Potri.019G023008 Populus trichocarpa HOM05D000067 ORTHO05D000280 1.0e-06 57.4 55 50.9
Potri.019G023018 Populus trichocarpa HOM05D000067 ORTHO05D000280 1.0e-06 57.4 55 50.9
TAR381G0140 Trochodendron aralioides HOM05D000067 ORTHO05D000280 1.0e-06 57.4 73 38.4
ECA233G1866 Erigeron canadensis HOM05D000067 ORTHO05D000280 1.3e-06 57.0 77 37.7
Manes.12G148666 Manihot esculenta HOM05D000067 ORTHO05D000280 1.3e-06 57.0 72 40.3
Manes.12G148700 Manihot esculenta HOM05D000067 ORTHO05D000280 1.3e-06 57.0 72 40.3
Potri.019G022338 Populus trichocarpa HOM05D000067 ORTHO05D000280 1.3e-06 57.0 68 44.1
Sabra19G0013800 Salix brachista HOM05D000067 ORTHO05D000280 1.3e-06 57.0 66 45.5
Atru.chr10.1273 Acer truncatum HOM05D000067 ORTHO05D000280 1.7e-06 56.6 65 41.5
COL.COLO4_22399 Corchorus olitorius HOM05D000067 ORTHO05D000280 1.7e-06 56.6 73 45.2
Potri.019G023000 Populus trichocarpa HOM05D000067 ORTHO05D000280 1.7e-06 56.6 68 44.1
QL09p025546 Quercus lobata HOM05D000067 ORTHO05D000097 1.7e-06 56.6 45 55.6
Gohir.A04G044700 Gossypium hirsutum HOM05D000067 ORTHO05D000280 2.3e-06 56.2 66 45.5
Gohir.A04G044750 Gossypium hirsutum HOM05D000067 ORTHO05D000280 2.3e-06 56.2 66 45.5
Oeu042990.1 Olea europaea HOM05D000067 ORTHO05D000280 2.3e-06 56.2 64 42.2
Sabra19G0013600 Salix brachista HOM05D000067 ORTHO05D000280 2.3e-06 56.2 58 46.6
Sabra19G0013700 Salix brachista HOM05D000067 ORTHO05D000280 2.3e-06 56.2 58 46.6
Sabra19G0013900 Salix brachista HOM05D000067 ORTHO05D000280 2.3e-06 56.2 55 49.1
SGA_v2.0_scaffold7G04111 Striga asiatica HOM05D000067 ORTHO05D000280 2.3e-06 56.2 81 35.8
CANSAT39G0001 Cannabis sativa HOM05D000067 ORTHO05D000280 3.0e-06 55.8 51 49.0
MBI01_g24894_MAGBIO Magnolia biondii HOM05D000067 ORTHO05D000669 3.0e-06 55.8 70 40.0
Oeu042987.1 Olea europaea HOM05D000067 ORTHO05D000280 3.0e-06 55.8 76 35.5
CSS0027651 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 3.9e-06 55.5 74 41.9
COL.COLO4_22400 Corchorus olitorius HOM05D000067 ORTHO05D000280 3.9e-06 55.5 82 41.5
Thecc.03G282500 Theobroma cacao HOM05D000067 ORTHO05D000280 3.9e-06 55.5 62 48.4
Dinv18948 Davidia involucrata HOM05D000067 ORTHO05D000280 5.1e-06 55.1 61 45.9
MBI01_g15708_MAGBIO Magnolia biondii HOM05D000067 ORTHO05D000280 5.1e-06 55.1 70 41.4
Sabra19G0014100 Salix brachista HOM05D000067 ORTHO05D000280 5.1e-06 55.1 66 43.9
Actinidia40426 Actinidia chinensis HOM05D000067 ORTHO05D000280 6.6e-06 54.7 109 32.1
CsaV3_2G017930 Cucumis sativus L. HOM05D000067 ORTHO05D000280 6.6e-06 54.7 59 40.7
Dinv15998 Davidia involucrata HOM05D000067 ORTHO05D000280 6.6e-06 54.7 62 43.5
Lsat_1_v5_gn_4_58020 Lactuca sativa HOM05D000067 ORTHO05D000280 6.6e-06 54.7 62 40.3
TWI79G0829 Tripterygium wilfordii HOM05D000067 ORTHO05D000280 6.6e-06 54.7 59 42.4
CANSAT21G0210 Cannabis sativa HOM05D000067 ORTHO05D000280 8.7e-06 54.3 64 39.1
Cpa.g.sc19.13 Carica papaya HOM05D000067 ORTHO05D000280 8.7e-06 54.3 51 52.9
Hma1.2p1_0439F.1_g153290 Hydrangea macrophylla HOM05D000067 ORTHO05D000280 8.7e-06 54.3 73 38.4


User provided reference genes

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