Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 7.6e-56 220.3 115 100.0
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.1e-27 126.7 112 65.2
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 3.2e-22 108.6 112 58.0
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 7.9e-21 104.0 112 58.9
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 2.3e-20 102.4 112 50.9
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 1.1e-19 100.1 112 52.7
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 1.5e-19 99.8 111 54.1
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.3e-19 98.6 111 45.0
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 4.3e-19 98.2 112 52.7
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.3e-19 98.2 112 48.2
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 5.7e-19 97.8 112 50.0
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 5.7e-19 97.8 112 48.2
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 5.7e-19 97.8 111 53.2
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 7.4e-19 97.4 111 53.2
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 9.7e-19 97.1 111 52.3
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 9.7e-19 97.1 111 52.3
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 9.7e-19 97.1 111 52.3
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.3e-18 96.7 111 52.3
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.3e-18 96.7 112 49.1
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 6.3e-18 94.4 112 48.2
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 8.2e-18 94.0 112 55.4
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 8.2e-18 94.0 112 50.9
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 1.1e-17 93.6 112 48.2
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 3.1e-17 92.0 114 49.1
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 5.3e-17 91.3 112 47.3
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 6.9e-17 90.9 112 50.0
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 1.2e-16 90.1 112 50.9
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 1.5e-16 89.7 117 51.3
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 3.4e-16 88.6 112 44.6
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 3.4e-16 88.6 112 45.5
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 1.3e-15 86.7 111 49.5
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 1.3e-15 86.7 108 49.1
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 1.7e-15 86.3 109 46.8
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.7e-15 86.3 104 51.9
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 2.2e-15 85.9 112 46.4
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 5.0e-15 84.7 112 48.2
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 5.0e-15 84.7 112 44.6
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 6.5e-15 84.3 112 46.4
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 1.1e-14 83.6 112 46.4
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 1.1e-14 83.6 113 46.0
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 1.1e-14 83.6 111 44.1
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 1.4e-14 83.2 112 44.6
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 1.9e-14 82.8 105 48.6
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 2.5e-14 82.4 111 44.1
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 2.5e-14 82.4 117 48.7
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 4.2e-14 81.6 115 46.1
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 4.2e-14 81.6 112 41.1
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 4.2e-14 81.6 111 43.2
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 5.5e-14 81.3 102 48.0
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 5.5e-14 81.3 111 42.3
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 7.2e-14 80.9 112 46.4
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 7.2e-14 80.9 114 44.7
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 9.4e-14 80.5 106 48.1
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 1.6e-13 79.7 104 45.2
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 1.6e-13 79.7 111 45.9
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 2.7e-13 79.0 110 43.6
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 4.6e-13 78.2 112 47.3
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 6.1e-13 77.8 108 41.7
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 6.1e-13 77.8 102 46.1
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 7.9e-13 77.4 114 43.0
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 7.9e-13 77.4 108 42.6
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.0e-12 77.0 106 44.3
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 1.0e-12 77.0 110 45.5
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 1.4e-12 76.6 108 42.6
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 1.8e-12 76.3 108 45.4
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 1.8e-12 76.3 105 44.8
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 3.9e-12 75.1 112 49.1
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 8.8e-12 73.9 104 42.3
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 1.1e-11 73.6 102 45.1
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 1.1e-11 73.6 110 46.4
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 2.0e-11 72.8 108 45.4
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 2.0e-11 72.8 110 42.7
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 3.3e-11 72.0 108 45.4
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 3.3e-11 72.0 112 40.2
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 4.3e-11 71.6 93 50.5
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 4.3e-11 71.6 111 44.1
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 5.7e-11 71.2 115 43.5
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 5.7e-11 71.2 115 43.5
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 7.4e-11 70.9 110 43.6
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 9.7e-11 70.5 104 39.4
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 9.7e-11 70.5 103 39.8
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 9.7e-11 70.5 125 39.2
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 1.3e-10 70.1 110 48.2
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 1.3e-10 70.1 125 39.2
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 2.2e-10 69.3 104 43.3
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 2.2e-10 69.3 104 42.3
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 2.8e-10 68.9 105 42.9
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 3.7e-10 68.6 107 43.0
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 6.3e-10 67.8 112 43.8
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 8.2e-10 67.4 108 44.4
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 1.1e-09 67.0 115 43.5
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 1.4e-09 66.6 116 38.8
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 1.4e-09 66.6 113 45.1
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 2.4e-09 65.9 106 40.6
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 4.1e-09 65.1 109 42.2
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.1e-09 65.1 112 42.9
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 5.3e-09 64.7 112 41.1
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 9.1e-09 63.9 111 38.7
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 1.5e-08 63.2 108 41.7
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 1.5e-08 63.2 108 41.7
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 2.0e-08 62.8 108 40.7
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 2.0e-08 62.8 108 40.7
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 2.0e-08 62.8 108 40.7
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.0e-08 62.8 114 41.2
Oeu030182.1 Olea europaea HOM05D005728 ORTHO05D005733 2.0e-08 62.8 108 38.0
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.6e-08 62.4 112 42.0
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 3.4e-08 62.0 112 39.3
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 4.5e-08 61.6 113 38.1
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 5.9e-08 61.2 103 35.0
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 5.9e-08 61.2 118 41.5
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 1.0e-07 60.5 103 37.9
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.0e-07 60.5 118 38.1
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 1.3e-07 60.1 99 37.4
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 2.2e-07 59.3 108 38.9
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 3.8e-07 58.5 113 37.2
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 3.8e-07 58.5 113 37.2
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 6.5e-07 57.8 115 37.4
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 3.2e-06 55.5 112 40.2
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 3.2e-06 55.5 106 38.7
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 4.2e-06 55.1 105 37.1
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 9.4e-06 53.9 112 35.7


User provided reference genes

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