Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.6e-168 595.9 283 100.0
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.7e-129 464.5 272 79.4
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 1.2e-115 420.2 277 72.6
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 8.2e-112 407.5 283 67.5
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 2.2e-109 399.4 254 72.0
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 6.5e-109 397.9 263 69.6
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 3.2e-108 395.6 253 71.5
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 3.2e-108 395.6 254 71.7
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 4.2e-108 395.2 253 71.5
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 9.4e-108 394.0 254 71.7
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 2.1e-107 392.9 265 69.1
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.1e-107 392.9 263 70.0
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.7e-107 392.5 262 69.8
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.0e-107 391.0 262 69.5
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 8.0e-107 391.0 247 72.9
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.4e-106 390.2 252 71.0
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.8e-106 389.8 277 66.4
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 3.0e-106 389.0 264 67.4
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.0e-106 388.7 262 66.8
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.0e-106 388.7 262 66.8
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.2e-106 388.3 252 70.6
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.5e-105 386.7 262 66.8
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 1.5e-105 386.7 258 68.2
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 2.6e-105 386.0 252 69.8
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 7.5e-105 384.4 247 71.3
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.3e-104 383.6 246 72.4
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.7e-104 383.3 262 66.4
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 3.7e-104 382.1 261 66.7
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 8.2e-104 380.9 261 67.0
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-103 380.6 246 70.7
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 2.2e-101 372.9 254 66.5
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 2.2e-101 372.9 279 62.0
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 2.9e-101 372.5 261 65.1
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 6.5e-101 371.3 240 68.8
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 9.4e-100 367.5 247 66.8
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 3.6e-99 365.5 244 67.2
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 3.0e-98 362.5 274 67.9
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.8e-95 353.2 354 52.0
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.5e-94 349.0 268 62.7
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.5e-94 349.0 264 61.0
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 4.5e-94 348.6 297 56.2
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.0e-90 335.9 271 59.0
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.6e-89 332.8 211 73.9
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.4e-87 327.0 218 65.6
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 5.4e-87 325.1 212 70.8
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.1e-84 317.4 249 61.8
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 3.3e-84 315.8 247 59.1
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 7.3e-84 314.7 261 56.3
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 9.5e-84 314.3 245 59.2
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 2.0e-78 296.6 260 56.9
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.2e-75 287.3 253 55.3
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.1e-74 284.3 232 57.8
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 1.4e-74 283.9 237 56.5
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 2.1e-70 270.0 184 65.2
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.6e-67 260.4 227 55.1
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 3.6e-67 259.2 184 64.1
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.2e-66 255.4 213 60.1
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 1.2e-65 254.2 164 64.6
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.5e-65 253.8 282 45.4
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.5e-65 253.8 249 48.2
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.4e-65 252.7 260 47.7
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 4.9e-64 248.8 271 45.8
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 6.4e-64 248.4 243 49.8
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 7.1e-63 245.0 157 70.7
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.3e-61 240.7 243 46.9
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.9e-60 236.9 258 46.1
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 5.6e-60 235.3 231 51.1
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 4.4e-57 225.7 180 56.1
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.1e-55 219.2 155 63.9
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 4.6e-54 215.7 154 61.0
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 4.6e-54 215.7 228 50.0
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.8e-50 203.8 258 38.8
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.3e-48 197.6 243 36.6
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.8e-48 196.1 240 37.5
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.8e-48 196.1 240 37.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.8e-43 179.9 143 60.1
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.4e-42 177.6 117 63.2
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 2.8e-35 153.3 99 74.7
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 6.2e-35 152.1 93 73.1
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 6.9e-34 148.7 97 71.1
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 6.4e-32 142.1 97 72.2
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 6.4e-32 142.1 97 72.2
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 1.9e-28 130.6 96 65.6
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 5.8e-25 119.0 99 57.6
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 4.6e-22 109.4 117 47.9
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 6.0e-22 109.0 70 65.7
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.9e-20 104.0 66 77.3
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.5e-12 77.0 44 86.4


User provided reference genes

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