Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G076400 Carya illinoinensis HOM05D003115 ORTHO05D003595 6.0e-183 644.0 327 100.0
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 6.5e-161 570.9 304 97.0
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 6.0e-106 388.3 304 68.4
Haze_07640 Corylus avellana HOM05D003115 ORTHO05D003595 4.4e-101 372.1 309 68.0
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 1.5e-96 357.1 309 65.4
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 3.1e-86 322.8 302 58.6
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 2.0e-85 320.1 305 60.7
Atru.chr4.1597 Acer truncatum HOM05D003115 ORTHO05D003595 2.2e-84 316.6 305 59.3
Prupe.3G077100 Prunus persica HOM05D003115 ORTHO05D003595 6.4e-84 315.1 302 55.6
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.7e-82 309.7 302 57.0
Prupe.3G074200 Prunus persica HOM05D003115 ORTHO05D003595 2.7e-82 309.7 302 54.3
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 3.5e-82 309.3 302 57.0
Potri.001G318800 Populus trichocarpa HOM05D003115 ORTHO05D003595 1.3e-81 307.4 303 56.1
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 1.1e-80 304.3 302 54.3
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 1.3e-79 300.8 303 54.8
Sabra16G0201800 Salix brachista HOM05D003115 ORTHO05D003595 8.1e-79 298.1 310 54.5
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 5.3e-78 295.4 303 54.1
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 1.2e-77 294.3 304 52.6
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 1.7e-76 290.4 308 54.5
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 3.8e-76 289.3 308 54.5
Thecc.04G196300 Theobroma cacao HOM05D003115 ORTHO05D003595 3.8e-76 289.3 307 54.7
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 4.6e-74 282.3 308 52.3
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 1.3e-73 280.8 303 49.2
COL.COLO4_33741 Corchorus olitorius HOM05D003115 ORTHO05D003595 1.8e-73 280.4 308 52.3
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 1.8e-73 280.4 302 51.7
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 3.9e-73 279.3 308 53.6
Duzib212G0201 Durio zibethinus HOM05D003115 ORTHO05D003595 1.1e-72 277.7 308 52.9
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 4.3e-72 275.8 298 51.3
Cpa.g.sc83.36 Carica papaya HOM05D003115 ORTHO05D003595 5.6e-72 275.4 303 52.1
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 5.6e-72 275.4 319 49.8
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.1e-71 273.5 319 48.9
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.8e-71 273.1 319 49.2
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 8.1e-71 271.6 303 52.8
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 6.9e-70 268.5 319 48.9
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 6.9e-70 268.5 320 52.2
Hma1.2p1_0039F.1_g024560 Hydrangea macrophylla HOM05D003115 ORTHO05D003595 5.8e-69 265.4 367 42.8
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 7.6e-69 265.0 307 49.2
Sc25g0005820 Simmondsia chinensis HOM05D003115 ORTHO05D003595 1.0e-68 264.6 305 47.2
MBI17_g03746_MAGBIO Magnolia biondii HOM05D003115 ORTHO05D003595 1.7e-68 263.8 305 50.5
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 3.8e-68 262.7 313 49.2
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 4.2e-67 259.2 305 48.9
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 7.1e-67 258.5 303 50.8
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 2.7e-66 256.5 305 48.9
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 6.0e-66 255.4 304 46.4
CsaV3_2G011790 Cucumis sativus L. HOM05D003115 ORTHO05D003595 8.7e-65 251.5 302 46.0
Nitab4.5_0000697g0090 Nicotiana tabacum HOM05D003115 ORTHO05D003595 1.9e-64 250.4 305 47.5
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 5.7e-64 248.8 305 47.9
Sed0014363 Sechium edule HOM05D003115 ORTHO05D003595 7.4e-64 248.4 301 46.2
MELO3C020422.2 Cucumis melo HOM05D003115 ORTHO05D003595 1.3e-63 247.7 302 45.4
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 1.6e-63 247.3 313 48.9
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 6.2e-63 245.4 303 46.5
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 1.2e-61 241.1 304 48.0
Hund11640 Selenicereus undatus HOM05D003115 ORTHO05D003595 1.5e-61 240.7 303 44.6
ClCG06G007990 Citrullus lanatus HOM05D003115 ORTHO05D003595 1.7e-60 237.3 294 45.9
Oeu043445.1 Olea europaea HOM05D003115 ORTHO05D003595 2.2e-60 236.9 306 48.4
Aqoxy5G00431 Aquilegia oxysepala HOM05D003115 ORTHO05D003595 3.8e-60 236.1 308 47.1
Ca_07922_v3 Cicer arietinum L. HOM05D003115 ORTHO05D003595 6.5e-60 235.3 303 45.2
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 3.2e-59 233.0 303 47.9
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 7.1e-59 231.9 305 46.9
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 1.6e-58 230.7 304 45.4
TPR.G14704 Trifolium pratense HOM05D003115 ORTHO05D003595 7.9e-58 228.4 303 43.6
Oeu002918.1 Olea europaea HOM05D003115 ORTHO05D003595 2.3e-57 226.9 305 46.6
Cc00_g24210 Coffea canephora HOM05D003115 ORTHO05D003595 1.5e-56 224.2 305 42.0
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 2.4e-54 216.9 307 43.0
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 2.0e-53 213.8 305 42.3
PSO210G2420 Papaver somniferum HOM05D003115 ORTHO05D003595 3.4e-53 213.0 294 44.6
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 2.2e-52 210.3 301 40.2
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 2.2e-52 210.3 303 42.9
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 5.0e-52 209.1 305 44.3
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 8.5e-52 208.4 314 42.7
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 1.1e-51 208.0 300 37.3
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 1.4e-51 207.6 305 43.3
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 1.9e-51 207.2 305 42.3
PSO832G1670 Papaver somniferum HOM05D003115 ORTHO05D003595 3.6e-50 203.0 294 42.5
Lalb_Chr23g0269101 Lupinus albus HOM05D003115 ORTHO05D003595 7.9e-50 201.8 304 42.4
CDE07G0754 Ceratophyllum demersum HOM05D003115 ORTHO05D003595 1.4e-49 201.1 315 38.7
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 2.3e-49 200.3 301 42.2
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 9.1e-46 188.3 304 42.1
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 2.9e-44 183.3 304 35.9
THA.LOC104808700 Tarenaya hassleriana HOM05D003115 ORTHO05D003595 3.2e-43 179.9 306 40.2
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 7.2e-43 178.7 361 34.9
Aa31LG2G19350 Aethionema arabicum HOM05D003115 ORTHO05D003595 6.1e-42 175.6 304 42.1
Carub.0007s0955 Capsella rubella HOM05D003115 ORTHO05D003595 4.5e-37 159.5 304 37.8
RcHm_v2.0_Chr2g0136151 Rosa chinensis HOM05D003115 ORTHO05D003595 2.9e-36 156.8 302 36.1
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 8.5e-36 155.2 315 34.6
AL1G39310 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 1.5e-35 154.5 304 36.2
AL1G41060 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 1.5e-35 154.5 304 36.8
AL7G21090 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 1.9e-35 154.1 304 37.5
AL1G38530 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 7.2e-35 152.1 304 36.8
AT4G30990 Arabidopsis thaliana HOM05D003115 ORTHO05D003595 1.2e-34 151.4 303 37.3
Actinidia30876 Actinidia chinensis HOM05D003115 ORTHO05D003595 1.4e-33 147.9 143 55.2
Carub.0001s2398 Capsella rubella HOM05D003115 ORTHO05D003595 1.4e-33 147.9 304 35.2
CARHR238880 Cardamine hirsuta HOM05D003115 ORTHO05D003595 2.3e-33 147.1 303 35.6
SEGI_06154 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 2.3e-33 147.1 312 32.1
A03p60500 Brassica napus HOM05D003115 ORTHO05D003595 3.0e-33 146.7 303 36.0
BraA03t15089Z Brassica rapa HOM05D003115 ORTHO05D003595 3.0e-33 146.7 303 36.0
BcaNung02730 Brassica carinata HOM05D003115 ORTHO05D003595 4.0e-33 146.4 303 36.6
BcaNung01550 Brassica carinata HOM05D003115 ORTHO05D003595 8.8e-33 145.2 304 36.5
Thhalv10024182m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 1.1e-32 144.8 305 36.1
CARHR024920 Cardamine hirsuta HOM05D003115 ORTHO05D003595 1.5e-32 144.4 285 36.8
C07p58370 Brassica napus HOM05D003115 ORTHO05D003595 9.7e-32 141.7 304 35.9
BolC7t46291H Brassica oleracea HOM05D003115 ORTHO05D003595 4.8e-31 139.4 303 35.6
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 8.2e-31 138.7 154 50.6
Carub.0005s0720 Capsella rubella HOM05D003115 ORTHO05D003595 9.1e-30 135.2 309 33.7
Thhalv10009353m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 1.2e-29 134.8 303 34.3
Sp7g28860 Schrenkiella parvula HOM05D003115 ORTHO05D003595 2.6e-29 133.7 304 35.9
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 4.7e-26 122.9 170 41.2
Cfa010533 Carpinus fangiana HOM05D003115 ORTHO05D003595 2.6e-24 117.1 302 35.1
HPP92_007267 Vanilla planifolia HOM05D003115 ORTHO05D003595 1.4e-22 111.3 179 40.8
Pp3c3_18970 Physcomitrium patens HOM05D003115 ORTHO05D003595 4.2e-19 99.8 316 27.2
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 2.3e-17 94.0 311 28.0
unitig_578.g16273 Utricularia gibba HOM05D003115 ORTHO05D003595 2.7e-13 80.5 225 31.1
Eucgr.H00031 Eucalyptus grandis HOM05D003115 ORTHO05D003595 2.9e-12 77.0 121 37.2
Zm00001eb092010 Zea mays HOM05D003115 ORTHO05D029342 9.8e-08 62.0 114 33.3
Zm00001eb154910 Zea mays HOM05D003115 ORTHO05D029342 9.8e-08 62.0 114 33.3
Actinidia30875 Actinidia chinensis HOM05D003115 ORTHO05D003595 1.3e-07 61.6 55 60.0
C05p23810 Brassica napus HOM05D003115 ORTHO05D003595 6.4e-07 59.3 64 50.0
BolC5t31100H Brassica oleracea HOM05D003115 ORTHO05D003595 6.4e-07 59.3 64 50.0


User provided reference genes

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