Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.3e-88 328.9 177 100.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 3.0e-51 205.7 176 68.8
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.8e-48 196.4 171 66.1
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-40 169.9 184 52.7
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 9.0e-40 167.5 176 52.8
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 9.9e-39 164.1 177 51.4
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.9e-37 159.8 177 59.9
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 5.1e-35 151.8 180 53.3
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-32 144.1 176 48.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 9.0e-32 141.0 181 49.2
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 5.8e-31 138.3 183 47.5
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 6.4e-30 134.8 178 49.4
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.4e-29 133.7 170 48.8
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 4.6e-28 128.6 168 45.2
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.8e-27 126.7 173 50.3
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.3e-27 126.3 171 52.6
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.0e-27 125.9 169 43.2
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 6.7e-27 124.8 175 42.9
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.1e-26 124.0 183 48.1
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.6e-26 121.7 169 42.6
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.3e-25 120.6 174 44.3
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.1e-25 119.8 169 41.4
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-24 117.5 175 46.9
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-24 117.5 175 46.9
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-24 117.5 175 46.9
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 4.0e-24 115.5 173 47.4
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 2.6e-23 112.8 176 41.5
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.0e-22 110.9 179 44.1
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 2.2e-22 109.8 176 38.6
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 4.9e-22 108.6 195 46.2
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 6.5e-22 108.2 175 40.0
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.1e-21 107.5 183 41.5
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 2.5e-21 106.3 178 42.7
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.5e-21 105.1 184 39.1
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 5.5e-21 105.1 162 48.1
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-20 104.0 178 37.6
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 1.2e-20 104.0 178 44.4
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.6e-20 103.6 176 47.2
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 7.9e-20 101.3 164 38.4
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.3e-19 99.8 176 36.9
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-18 97.4 178 43.8
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 1.9e-18 96.7 79 60.8
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.5e-18 96.3 147 42.9
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 9.6e-18 94.4 153 41.8
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.6e-17 93.6 181 43.6
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.6e-17 93.6 178 39.3
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 1.6e-17 93.6 169 42.0
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.1e-17 93.2 187 36.9
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 8.2e-17 91.3 184 41.8
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.1e-16 90.9 183 41.5
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.8e-16 90.1 183 41.0
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-16 90.1 179 35.8
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 5.3e-16 88.6 174 40.2
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.2e-15 87.4 186 39.2
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.5e-15 87.0 183 40.4
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 2.0e-15 86.7 196 39.8
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 2.6e-15 86.3 165 37.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.6e-15 86.3 177 35.0
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 2.6e-15 86.3 76 57.9
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 4.5e-15 85.5 157 38.9
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 5.8e-15 85.1 151 35.8
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 5.8e-15 85.1 73 58.9
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 1.0e-14 84.3 72 59.7
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 2.2e-14 83.2 159 37.1
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 3.8e-14 82.4 159 35.8
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 3.8e-14 82.4 161 37.3
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.8e-14 82.4 174 37.9
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-13 80.9 175 36.0
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-13 80.9 175 36.0
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.1e-13 80.9 159 39.6
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 7.2e-13 78.2 99 46.5
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.6e-12 77.0 100 42.0
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-12 77.0 92 55.4
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.7e-12 76.3 103 43.7
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 3.5e-12 75.9 95 48.4
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 3.5e-12 75.9 161 31.7
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 6.1e-12 75.1 169 39.6
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 7.9e-12 74.7 81 49.4
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.0e-11 74.3 136 32.4
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.0e-11 74.3 67 55.2
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 3.0e-11 72.8 180 33.9
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 3.0e-11 72.8 172 34.3
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 3.9e-11 72.4 95 46.3
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 5.1e-11 72.0 137 36.5
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.7e-11 71.6 77 48.1
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.1e-10 70.9 150 32.0
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.9e-10 70.1 145 32.4
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 3.3e-10 69.3 147 29.9
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 3.3e-10 69.3 135 36.3
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 3.3e-10 69.3 170 34.1
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 5.7e-10 68.6 82 51.2
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.7e-10 68.6 74 47.3
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 5.7e-10 68.6 146 34.9
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 5.7e-10 68.6 88 39.8
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 7.4e-10 68.2 92 42.4
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 9.7e-10 67.8 90 44.4
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 1.3e-09 67.4 76 50.0
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 2.2e-09 66.6 78 50.0
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 2.8e-09 66.2 75 46.7
Medtr4g063885 Medicago truncatula HOM05D005967 ORTHO05D005174 3.7e-09 65.9 102 39.2
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 4.8e-09 65.5 121 35.5
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 8.2e-09 64.7 137 34.3
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-08 64.3 178 36.5
TAR688G0002 Trochodendron aralioides HOM05D000645 ORTHO05D005174 2.4e-08 63.2 94 41.5
TPR.G14476 Trifolium pratense HOM05D005967 ORTHO05D005174 4.1e-08 62.4 96 46.9
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 6.9e-08 61.6 84 48.8
Lalb_Chr03g0026661 Lupinus albus HOM05D005967 ORTHO05D005174 9.0e-08 61.2 127 37.0
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 1.5e-07 60.5 74 44.6
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.5e-07 60.5 77 49.4
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 4.5e-07 58.9 65 47.7
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 5.9e-07 58.5 97 42.3
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 7.7e-07 58.2 100 44.0
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 1.0e-06 57.8 88 43.2
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.3e-06 57.4 159 30.8
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 1.3e-06 57.4 76 42.1
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.3e-06 57.4 34 73.5
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.7e-06 57.0 74 44.6
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 2.2e-06 56.6 80 46.2
TPR.G23268 Trifolium pratense HOM05D005967 ORTHO05D005174 2.2e-06 56.6 68 48.5
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 2.2e-06 56.6 59 47.5
Lalb_Chr01g0003691 Lupinus albus HOM05D005967 ORTHO05D005174 3.8e-06 55.8 84 42.9
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 3.8e-06 55.8 88 43.2
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 5.0e-06 55.5 94 44.7
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 5.0e-06 55.5 73 43.8
Thhalv10015059m.g Eutrema salsugineum HOM05D010528 ORTHO05D005174 5.0e-06 55.5 99 43.4
Medtr4g021870 Medicago truncatula HOM05D005967 ORTHO05D005174 5.0e-06 55.5 55 52.7
Medtr7g060440 Medicago truncatula HOM05D005967 ORTHO05D005174 5.0e-06 55.5 69 49.3
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 5.0e-06 55.5 83 44.6
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 6.5e-06 55.1 100 43.0
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 6.5e-06 55.1 62 53.2
SGA_v2.0_scaffold126G33790 Striga asiatica HOM05D005967 ORTHO05D005174 6.5e-06 55.1 63 46.0
MD12G1140600 Malus domestica HOM05D005967 ORTHO05D005174 8.5e-06 54.7 177 28.8


User provided reference genes

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