Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.1e-67 258.8 128 100.0
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 7.1e-63 243.8 128 91.4
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 3.7e-59 231.5 130 86.9
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 1.1e-58 229.9 128 85.9
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.4e-58 228.8 128 86.7
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 2.4e-58 228.8 131 86.3
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-58 228.4 130 86.9
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-58 228.4 130 86.9
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 5.3e-58 227.6 133 85.0
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.3e-58 227.6 129 86.8
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 5.3e-58 227.6 130 86.9
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 6.9e-58 227.3 131 86.3
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 6.9e-58 227.3 134 84.3
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.9e-58 227.3 130 86.2
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 6.9e-58 227.3 130 83.8
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.2e-57 226.5 130 85.4
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.2e-57 226.5 130 85.4
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.2e-57 226.5 129 83.7
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 1.5e-57 226.1 128 85.9
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 1.5e-57 226.1 132 83.3
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.0e-57 225.7 131 85.5
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 2.0e-57 225.7 134 82.8
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.0e-57 225.7 131 85.5
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 3.4e-57 224.9 131 84.7
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 3.4e-57 224.9 131 84.7
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 3.4e-57 224.9 131 84.7
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 4.5e-57 224.6 129 84.5
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 5.8e-57 224.2 128 87.5
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 5.8e-57 224.2 130 86.2
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 5.8e-57 224.2 128 84.4
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 7.6e-57 223.8 130 83.8
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.3e-56 223.0 133 84.2
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 1.3e-56 223.0 129 83.7
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.2e-56 222.2 130 82.3
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.2e-56 222.2 131 84.7
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.2e-56 222.2 128 82.8
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 6.5e-56 220.7 133 82.7
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.1e-55 219.9 128 81.2
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 1.4e-55 219.5 128 82.0
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 3.2e-55 218.4 129 82.9
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 4.2e-55 218.0 128 81.2
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 4.2e-55 218.0 129 82.9
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.5e-55 217.6 128 85.2
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 7.1e-55 217.2 130 80.8
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 9.3e-55 216.9 130 80.0
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 9.3e-55 216.9 128 78.9
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 9.3e-55 216.9 128 79.7
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 1.6e-54 216.1 129 80.6
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.6e-54 216.1 134 82.1
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 2.1e-54 215.7 130 79.2
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 2.7e-54 215.3 128 78.9
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 3.5e-54 214.9 133 82.0
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 3.5e-54 214.9 130 83.1
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.6e-54 214.5 129 84.5
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 4.6e-54 214.5 131 77.9
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 4.6e-54 214.5 128 80.5
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 6.0e-54 214.2 128 78.9
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-53 213.0 132 78.8
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 77.3
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 2.3e-53 212.2 132 78.0
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 77.3
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 3.0e-53 211.8 131 77.1
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 3.9e-53 211.5 129 79.1
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 5.1e-53 211.1 130 78.5
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 5.1e-53 211.1 129 79.1
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 5.1e-53 211.1 134 73.9
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 6.7e-53 210.7 130 79.2
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 6.7e-53 210.7 128 79.7
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 78.6
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 75.8
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.1e-52 209.9 130 80.8
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 80.0
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 1.5e-52 209.5 129 77.5
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.9e-52 209.1 130 80.0
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.9e-52 209.1 130 80.0
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 1.9e-52 209.1 128 79.7
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 1.9e-52 209.1 130 77.7
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 1.9e-52 209.1 130 77.7
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 3.3e-52 208.4 128 79.7
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 4.3e-52 208.0 132 76.5
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 4.3e-52 208.0 128 78.1
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.3e-52 208.0 130 77.7
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 5.7e-52 207.6 128 74.2
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 7.4e-52 207.2 129 75.2
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 9.6e-52 206.8 132 77.3
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 9.6e-52 206.8 145 75.9
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 1.6e-51 206.1 127 78.0
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 1.6e-51 206.1 131 74.8
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.7e-51 204.9 128 76.6
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 3.7e-51 204.9 121 84.3
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 4.8e-51 204.5 133 74.4
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 4.8e-51 204.5 128 77.3
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 6.2e-51 204.1 128 75.8
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 6.2e-51 204.1 117 83.8
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.4e-50 203.0 128 79.7
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 1.8e-50 202.6 128 75.8
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.8e-50 202.6 128 77.3
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.1e-50 201.8 133 74.4
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.1e-50 201.8 117 82.9
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 4.1e-50 201.4 133 73.7
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 4.1e-50 201.4 133 75.2
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 5.3e-50 201.1 134 73.1
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 5.3e-50 201.1 128 73.4
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 5.3e-50 201.1 130 76.9
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 6.9e-50 200.7 132 74.2
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.2e-49 199.9 128 75.0
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 2.0e-49 199.1 115 80.9
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 2.6e-49 198.7 133 72.9
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 2.6e-49 198.7 133 72.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 3.4e-49 198.4 133 72.2
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 4.5e-49 198.0 131 71.8
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 5.8e-49 197.6 133 72.2
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 5.8e-49 197.6 133 72.2
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 5.8e-49 197.6 133 73.7
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.6e-49 197.2 134 73.1
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 7.6e-49 197.2 133 72.2
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 7.6e-49 197.2 128 71.9
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 7.6e-49 197.2 133 73.7
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 1.0e-48 196.8 133 71.4
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 1.0e-48 196.8 134 71.6
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.3e-48 196.4 134 71.6
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.3e-48 196.4 134 71.6
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.3e-48 196.4 134 71.6
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 1.3e-48 196.4 134 71.6
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 1.7e-48 196.1 128 71.9
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 2.9e-48 195.3 124 74.2
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 3.8e-48 194.9 124 74.2
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 5.0e-48 194.5 133 71.4
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 6.5e-48 194.1 130 72.3
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 8.4e-48 193.7 129 71.3
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 8.4e-48 193.7 130 72.3
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.4e-47 193.0 125 78.4
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 136 73.5
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 5.5e-47 191.0 112 76.8
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 7.1e-47 190.7 117 76.1
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 115 77.4
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.6e-46 189.5 122 75.4
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 2.1e-46 189.1 130 68.5
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 6.1e-46 187.6 125 72.8
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 2.3e-45 185.7 115 75.7
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 6.7e-45 184.1 120 72.5
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 6.7e-45 184.1 137 68.6
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 2.2e-40 169.1 112 67.0
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 5.0e-40 167.9 128 60.9
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 8.5e-40 167.2 131 61.8
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 9.4e-39 163.7 91 82.4
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 2.1e-38 162.5 103 66.0
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.4e-37 159.8 118 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 1.7e-35 152.9 124 61.3
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 2.9e-32 142.1 113 56.6
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 1.1e-31 140.2 74 85.1
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.0e-29 132.1 85 81.2
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 4.4e-28 128.3 78 75.6
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 6.3e-27 124.4 72 76.4
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.1e-26 121.7 73 75.3
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.9e-23 112.8 60 85.0
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 2.5e-23 112.5 77 68.8
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.6e-22 109.8 78 64.1
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 7.4e-20 100.9 60 88.3
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 4.8e-19 98.2 56 82.1
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 2.3e-13 79.3 50 74.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 4.4e-12 75.1 60 60.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 3.1e-10 68.9 95 35.8
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.0e-08 63.9 55 56.4


User provided reference genes

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