Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 2.3e-80 302.4 173 100.0
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 2.4e-53 212.6 170 71.2
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 4.1e-53 211.8 170 71.2
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 3.4e-52 208.8 170 70.6
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 2.6e-36 156.0 177 63.3
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 2.6e-36 156.0 177 63.3
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 2.6e-36 156.0 177 63.3
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 2.6e-36 156.0 171 64.3
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.9e-34 149.8 172 54.7
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 3.2e-34 149.1 175 50.3
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.2e-34 149.1 175 50.3
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 3.2e-34 149.1 175 53.1
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 7.2e-34 147.9 175 51.4
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.6e-33 146.7 174 50.6
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.6e-33 145.6 175 50.9
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.0e-32 144.1 174 49.4
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.0e-32 142.5 172 50.6
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 3.3e-31 139.0 175 58.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 3.7e-30 135.6 173 59.0
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 4.8e-30 135.2 177 49.2
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 2.4e-29 132.9 177 58.8
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 3.1e-29 132.5 172 51.2
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 7.0e-29 131.3 171 53.2
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.0e-28 129.8 178 48.9
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 2.6e-28 129.4 174 51.1
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 3.8e-27 125.6 168 50.0
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 8.5e-27 124.4 173 56.1
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.1e-26 124.0 170 51.2
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.9e-26 123.2 173 49.1
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 3.2e-26 122.5 163 46.0
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 4.2e-26 122.1 174 44.3
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 9.4e-26 120.9 171 53.8
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.6e-25 120.2 171 45.6
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 2.1e-25 119.8 172 52.9
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 2.7e-25 119.4 166 47.0
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 3.6e-25 119.0 178 51.7
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 6.1e-25 118.2 145 51.0
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 8.0e-25 117.9 151 54.3
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.0e-24 117.5 165 47.3
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 4.0e-24 115.5 151 53.0
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 4.0e-24 115.5 186 45.7
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 5.2e-24 115.2 143 58.0
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 2.6e-23 112.8 173 50.9
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 3.3e-23 112.5 177 45.2
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 4.4e-23 112.1 191 47.1
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 5.7e-23 111.7 181 48.6
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 7.5e-23 111.3 144 50.0
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 2.2e-22 109.8 151 50.3
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.2e-22 109.8 109 57.8
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 4.8e-22 108.6 181 48.1
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.1e-21 107.5 171 42.1
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 4.1e-21 105.5 186 46.2
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 4.1e-21 105.5 177 41.8
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 5.3e-21 105.1 170 44.1
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 7.0e-21 104.8 154 48.1
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 9.1e-21 104.4 175 43.4
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 9.1e-21 104.4 175 48.6
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 2.0e-20 103.2 146 50.7
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 3.5e-20 102.4 170 47.6
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 3.5e-20 102.4 175 42.9
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 4.5e-20 102.1 113 55.8
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 7.7e-20 101.3 178 44.4
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.0e-19 100.9 178 43.3
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 1.3e-19 100.5 169 42.0
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 6.5e-19 98.2 171 43.9
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 6.5e-19 98.2 96 65.6
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 6.5e-19 98.2 91 60.4
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 8.5e-19 97.8 171 43.9
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.9e-18 96.7 114 55.3
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.9e-18 96.7 174 42.0
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 3.2e-18 95.9 183 42.6
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 4.2e-18 95.5 169 41.4
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 4.2e-18 95.5 167 43.1
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 7.2e-18 94.7 177 43.5
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 1.2e-17 94.0 175 39.4
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.2e-17 94.0 102 64.7
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.6e-17 93.6 188 42.0
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.6e-17 93.6 90 64.4
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.6e-17 92.4 108 55.6
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 4.7e-17 92.0 145 57.9
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 8.0e-17 91.3 147 53.1
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.4e-16 90.5 186 39.8
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 1.4e-16 90.5 152 48.7
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.8e-16 90.1 174 44.8
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.0e-16 89.4 181 43.1
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 5.2e-16 88.6 176 46.0
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 2.0e-15 86.7 172 40.7
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 2.0e-15 86.7 172 40.7
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.6e-15 86.3 171 39.2
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.4e-15 85.9 112 50.0
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 5.7e-15 85.1 202 37.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 9.8e-15 84.3 171 39.8
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.7e-14 83.6 172 40.1
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 3.7e-14 82.4 123 51.2
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 6.3e-14 81.6 119 47.9
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 9.1e-13 77.8 171 37.4
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 2.7e-12 76.3 138 38.4
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 5.9e-12 75.1 75 60.0
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 2.9e-11 72.8 70 58.6
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 9.4e-10 67.8 174 43.1
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 9.4e-10 67.8 73 52.1
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 5.2e-08 62.0 76 48.7
TWI31G0635 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 3.4e-07 59.3 141 39.0
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 5.7e-07 58.5 176 40.3
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 1.3e-06 57.4 49 57.1
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 1.3e-06 57.4 49 57.1
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 1.3e-06 57.4 49 57.1


User provided reference genes

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