Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 8.2e-39 163.3 86 100.0
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 7.7e-37 156.8 86 94.2
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 1.1e-35 152.9 86 94.2
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 9.4e-35 149.8 86 83.7
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 1.2e-34 149.4 86 83.7
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 1.6e-34 149.1 86 90.7
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 3.6e-34 147.9 86 82.6
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 3.6e-34 147.9 86 82.6
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 3.6e-34 147.9 86 82.6
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 6.1e-34 147.1 86 88.4
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 6.1e-34 147.1 84 90.5
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 1.0e-33 146.4 86 77.9
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 2.3e-33 145.2 85 91.8
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 2.3e-33 145.2 86 88.4
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 3.0e-33 144.8 85 78.8
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 3.9e-33 144.4 86 88.4
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 3.9e-33 144.4 86 88.4
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 5.2e-33 144.1 86 86.0
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 6.7e-33 143.7 86 81.4
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 8.8e-33 143.3 84 90.5
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 1.5e-32 142.5 86 87.2
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 1.5e-32 142.5 88 86.4
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 2.0e-32 142.1 86 76.7
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 3.3e-32 141.4 90 86.7
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 3.3e-32 141.4 80 83.8
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 5.7e-32 140.6 84 79.8
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 7.4e-32 140.2 80 82.5
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 9.7e-32 139.8 84 79.8
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 2.2e-31 138.7 84 78.6
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 2.2e-31 138.7 84 86.9
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 2.2e-31 138.7 86 75.6
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 2.8e-31 138.3 86 87.2
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 3.7e-31 137.9 79 79.7
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 3.7e-31 137.9 79 79.7
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 3.7e-31 137.9 84 78.6
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 6.3e-31 137.1 84 75.0
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 8.2e-31 136.7 84 85.7
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 8.2e-31 136.7 79 79.7
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 8.2e-31 136.7 79 79.7
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 8.2e-31 136.7 83 75.9
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 1.1e-30 136.3 78 79.5
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 2.4e-30 135.2 84 75.0
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 3.1e-30 134.8 86 72.1
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 4.1e-30 134.4 84 76.2
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 5.3e-30 134.0 81 76.5
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 2.0e-29 132.1 93 69.9
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 2.6e-29 131.7 84 73.8
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 3.5e-29 131.3 86 70.9
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 5.9e-29 130.6 86 73.3
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 7.7e-29 130.2 80 73.8
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 1.0e-28 129.8 84 73.8
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 1.3e-28 129.4 93 67.7
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.7e-28 129.0 86 68.6
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 2.2e-28 128.6 84 83.3
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 3.8e-28 127.9 86 67.4
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 5.0e-28 127.5 76 76.3
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 5.0e-28 127.5 74 89.2
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 8.5e-28 126.7 76 75.0
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 1.1e-27 126.3 85 78.8
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.1e-27 126.3 89 66.3
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.1e-27 126.3 85 70.6
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 1.1e-27 126.3 85 70.6
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 1.5e-27 125.9 87 72.4
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 1.9e-27 125.6 73 79.5
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 1.9e-27 125.6 85 67.1
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 1.9e-27 125.6 89 66.3
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 2.5e-27 125.2 84 69.0
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 3.2e-27 124.8 85 69.4
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 3.2e-27 124.8 85 78.8
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 4.2e-27 124.4 84 67.9
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 5.5e-27 124.0 84 66.7
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 5.5e-27 124.0 89 66.3
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 5.5e-27 124.0 89 66.3
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 7.2e-27 123.6 85 69.4
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 7.2e-27 123.6 85 69.4
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 7.2e-27 123.6 85 69.4
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 7.2e-27 123.6 76 73.7
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 7.2e-27 123.6 87 70.1
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 9.4e-27 123.2 86 69.8
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 1.2e-26 122.9 76 73.7
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 1.6e-26 122.5 86 69.8
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 2.1e-26 122.1 86 65.1
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 2.1e-26 122.1 76 72.4
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 2.1e-26 122.1 76 72.4
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 4.7e-26 120.9 70 80.0
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 4.7e-26 120.9 70 80.0
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 4.7e-26 120.9 84 70.2
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 6.1e-26 120.6 87 67.8
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 6.1e-26 120.6 86 64.0
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 8.0e-26 120.2 84 67.9
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 1.0e-25 119.8 99 71.7
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 1.8e-25 119.0 86 62.8
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 1.8e-25 119.0 76 71.1
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 2.3e-25 118.6 86 62.8
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 4.0e-25 117.9 79 77.2
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 6.7e-25 117.1 82 64.6
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 6.7e-25 117.1 68 80.9
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 6.7e-25 117.1 83 60.2
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 8.8e-25 116.7 84 66.7
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 8.8e-25 116.7 86 62.8
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 1.2e-24 116.3 85 75.3
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 1.2e-24 116.3 84 63.1
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 1.2e-24 116.3 70 75.7
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 1.5e-24 115.9 79 65.8
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 1.5e-24 115.9 85 74.1
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 2.6e-24 115.2 87 62.1
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 3.3e-24 114.8 68 79.4
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 4.4e-24 114.4 84 61.9
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 5.7e-24 114.0 86 60.5
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 7.5e-24 113.6 92 60.9
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 9.7e-24 113.2 95 56.8
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 9.7e-24 113.2 63 81.0
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 9.7e-24 113.2 69 88.4
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 2.8e-23 111.7 87 59.8
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 6.3e-23 110.5 98 55.1
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 8.3e-23 110.2 68 72.1
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 8.3e-23 110.2 101 57.4
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 1.4e-22 109.4 78 61.5
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 3.1e-22 108.2 86 59.3
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 4.1e-22 107.8 73 63.0
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 5.3e-22 107.5 61 82.0
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 7.0e-22 107.1 95 53.7
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 7.0e-22 107.1 65 73.8
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 9.1e-22 106.7 86 57.0
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 1.2e-21 106.3 84 64.3
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 3.5e-21 104.8 76 65.8
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 5.9e-21 104.0 115 47.0
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 5.0e-20 100.9 84 63.1
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 5.5e-19 97.4 72 63.9
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 2.1e-18 95.5 67 68.7
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 2.1e-18 95.5 86 62.8
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.7e-18 95.1 85 60.0
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 4.7e-18 94.4 71 62.0
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 8.0e-18 93.6 74 63.5
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 1.4e-17 92.8 53 79.2
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 1.8e-17 92.4 52 80.8
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 3.0e-17 91.7 87 52.9
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 8.8e-17 90.1 52 76.9
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 2.0e-16 89.0 55 72.7
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 5.7e-16 87.4 54 70.4
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 7.5e-16 87.0 84 56.0
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 9.8e-16 86.7 47 85.1
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 1.7e-15 85.9 80 43.8
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 2.2e-15 85.5 71 49.3
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.8e-15 85.1 43 90.7
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 1.1e-14 83.2 56 69.6
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 9.1e-14 80.1 97 45.4
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.6e-13 79.3 70 58.6
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 2.7e-13 78.6 100 46.0
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 1.0e-12 76.6 47 68.1
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 1.7e-12 75.9 54 59.3
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 6.6e-12 73.9 72 54.2
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 1.2e-10 69.7 62 48.4
PRCOL_00001542 Prasinoderma coloniale HOM05D002457 ORTHO05D005262 3.0e-09 65.1 59 57.6
TPR.G13621 Trifolium pratense HOM05D004551 ORTHO05D005262 3.0e-09 65.1 59 57.6
MELO3C035440.2 Cucumis melo HOM05D004551 ORTHO05D005262 5.7e-08 60.8 116 39.7
SHI22087 Sapria himalayana HOM05D004551 ORTHO05D005262 2.8e-07 58.5 57 47.4
SEGI_01909 Sequoiadendron giganteum HOM05D004551 ORTHO05D005262 7.0e-06 53.9 29 86.2


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