Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G059600 Carya illinoinensis HOM05D005476 ORTHO05D006886 3.0e-218 761.5 375 100.0
CiPaw.13G077600 Carya illinoinensis HOM05D005476 ORTHO05D006886 5.0e-173 611.3 363 82.4
Haze_24322 Corylus avellana HOM05D005476 ORTHO05D006886 9.4e-164 580.5 359 79.9
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 3.9e-162 575.1 359 79.4
QL01p038276 Quercus lobata HOM05D005476 ORTHO05D006886 1.2e-153 547.0 364 75.5
Prupe.6G057500 Prunus persica HOM05D005476 ORTHO05D006886 8.0e-147 524.2 366 69.9
RcHm_v2.0_Chr5g0069451 Rosa chinensis HOM05D005476 ORTHO05D006886 1.2e-145 520.4 358 72.1
FvH4_3g38550 Fragaria vesca HOM05D005476 ORTHO05D006886 3.5e-142 508.8 350 71.7
MD11G1074700 Malus domestica HOM05D005476 ORTHO05D006886 4.5e-142 508.4 348 71.3
Dinv14437 Davidia involucrata HOM05D005476 ORTHO05D006886 5.9e-142 508.1 364 70.1
FAN11G1091 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.7e-141 506.5 350 71.4
FAN16G3667 Fragaria x ananassa HOM05D005476 ORTHO05D006886 3.8e-141 505.4 350 71.1
MD03G1070700 Malus domestica HOM05D005476 ORTHO05D006886 1.1e-140 503.8 348 71.3
FAN21G0574 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.9e-140 503.1 350 70.9
Potri.009G046200 Populus trichocarpa HOM05D005476 ORTHO05D006886 4.7e-139 498.4 354 69.8
Dinv28640 Davidia involucrata HOM05D005476 ORTHO05D006886 1.5e-137 493.4 355 69.9
Thecc.09G301800 Theobroma cacao HOM05D005476 ORTHO05D006886 1.5e-137 493.4 345 70.7
FAN25G3001 Fragaria x ananassa HOM05D005476 ORTHO05D006886 7.5e-137 491.1 376 66.2
CANSAT25G3760 Cannabis sativa HOM05D005476 ORTHO05D006886 1.3e-136 490.3 360 67.8
Duzib168G1303 Durio zibethinus HOM05D005476 ORTHO05D006886 1.1e-135 487.3 344 68.9
TWI31G0160 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 1.2e-134 483.8 356 69.4
Sabra09G0033300 Salix brachista HOM05D005476 ORTHO05D006886 3.5e-134 482.3 347 69.5
Atru.chr3.4220 Acer truncatum HOM05D005476 ORTHO05D006886 4.5e-134 481.9 345 69.9
COL.COLO4_19157 Corchorus olitorius HOM05D005476 ORTHO05D006886 7.8e-134 481.1 346 69.4
Potri.001G251500 Populus trichocarpa HOM05D005476 ORTHO05D006886 2.3e-133 479.6 349 67.3
Cpa.g.sc415.4 Carica papaya HOM05D005476 ORTHO05D006886 3.9e-133 478.8 349 69.1
TWI79G0899 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 6.6e-133 478.0 356 68.5
Duzib170G1024 Durio zibethinus HOM05D005476 ORTHO05D006886 1.1e-132 477.2 346 68.8
TAR636G1181 Trochodendron aralioides HOM05D005476 ORTHO05D006886 2.5e-132 476.1 363 66.1
Gorai.006G106700 Gossypium raimondii HOM05D005476 ORTHO05D006886 1.2e-131 473.8 346 67.6
Manes.02G119400 Manihot esculenta HOM05D005476 ORTHO05D006886 3.6e-131 472.2 339 68.7
Eucgr.B02253 Eucalyptus grandis HOM05D005476 ORTHO05D006886 1.5e-129 466.8 364 64.8
CSS0011477 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 5.8e-129 464.9 352 67.9
TAR633G0563 Trochodendron aralioides HOM05D005476 ORTHO05D006886 5.8e-129 464.9 355 66.5
CSS0028478 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 7.5e-129 464.5 352 67.3
Manes.01G161600 Manihot esculenta HOM05D005476 ORTHO05D006886 6.4e-128 461.5 318 70.8
Nn2g13708 Nelumbo nucifera HOM05D005476 ORTHO05D006886 1.4e-127 460.3 358 62.6
Ciclev10028681m.g Citrus clementina HOM05D005476 ORTHO05D006886 1.2e-126 457.2 328 67.7
GSVIVG01024740001 Vitis vinifera HOM05D005476 ORTHO05D006886 1.2e-126 457.2 362 65.5
Peaxi162Scf00540g00426 Petunia axillaris HOM05D005476 ORTHO05D006886 2.1e-123 446.4 353 64.6
Hund18848 Selenicereus undatus HOM05D005476 ORTHO05D006886 2.1e-123 446.4 348 64.9
Nitab4.5_0000010g0290 Nicotiana tabacum HOM05D005476 ORTHO05D006886 8.0e-123 444.5 345 64.9
Nitab4.5_0001806g0030 Nicotiana tabacum HOM05D005476 ORTHO05D006886 3.1e-122 442.6 344 64.8
Sopen06g033350 Solanum pennellii HOM05D005476 ORTHO05D006886 3.1e-122 442.6 342 65.2
Solyc06g076950.3 Solanum lycopersicum HOM05D005476 ORTHO05D006886 4.0e-122 442.2 342 64.9
CAN.G394.127 Capsicum annuum HOM05D005476 ORTHO05D006886 1.2e-121 440.7 343 64.7
ClCG03G000760 Citrullus lanatus HOM05D005476 ORTHO05D006886 2.6e-121 439.5 360 62.2
MELO3C020550.2 Cucumis melo HOM05D005476 ORTHO05D006886 3.4e-121 439.1 342 64.0
DCAR_007375 Daucus carota HOM05D005476 ORTHO05D006886 4.4e-121 438.7 328 67.7
Cc01_g14180 Coffea canephora HOM05D005476 ORTHO05D006886 5.8e-121 438.3 316 68.0
PGSC0003DMG400030356 Solanum tuberosum HOM05D005476 ORTHO05D006886 1.3e-120 437.2 342 64.6
Sed0014418 Sechium edule HOM05D005476 ORTHO05D006886 1.4e-119 433.7 360 61.4
THA.LOC104810712 Tarenaya hassleriana HOM05D005476 ORTHO05D006886 2.4e-119 433.0 338 64.2
Lsat_1_v5_gn_9_20101 Lactuca sativa HOM05D005476 ORTHO05D006886 4.1e-119 432.2 324 67.6
Aqoxy2G00901 Aquilegia oxysepala HOM05D005476 ORTHO05D006886 7.1e-119 431.4 358 60.3
Sed0016907 Sechium edule HOM05D005476 ORTHO05D006886 6.0e-118 428.3 360 60.6
Gohir.A09G090300 Gossypium hirsutum HOM05D005476 ORTHO05D006886 2.8e-115 419.5 286 69.6
EL10Ac7g16167 Beta vulgaris HOM05D005476 ORTHO05D006886 3.6e-115 419.1 344 62.5
LjContig00155g0002690 Lotus japonicus HOM05D005476 ORTHO05D006886 3.6e-115 419.1 343 61.2
Ah.08g221180 Amaranthus hybridus HOM05D005476 ORTHO05D006886 1.4e-114 417.2 344 62.5
Glyma.14G193500 Glycine max HOM05D005476 ORTHO05D006886 3.1e-114 416.0 351 60.1
AUR62020130 Chenopodium quinoa HOM05D005476 ORTHO05D006886 4.0e-114 415.6 342 62.6
Gohir.D09G090400 Gossypium hirsutum HOM05D005476 ORTHO05D006886 4.0e-114 415.6 286 69.2
AUR62001646 Chenopodium quinoa HOM05D005476 ORTHO05D006886 6.8e-114 414.8 344 62.2
SalBow2G2575 Salvia bowleyana HOM05D005476 ORTHO05D006886 8.9e-114 414.5 339 61.9
Lalb_Chr17g0345081 Lupinus albus HOM05D005476 ORTHO05D006886 9.9e-113 411.0 351 60.4
SGA_v2.0_scaffold120G32912 Striga asiatica HOM05D005476 ORTHO05D006886 1.3e-112 410.6 332 62.3
AT5G58730 Arabidopsis thaliana HOM05D005476 ORTHO05D006886 2.2e-112 409.8 325 63.7
HanXRQChr04g0109161 Helianthus annuus HOM05D005476 ORTHO05D006886 4.9e-112 408.7 321 63.9
AL8G35010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 6.4e-112 408.3 325 64.0
CARHR272640 Cardamine hirsuta HOM05D005476 ORTHO05D006886 6.4e-112 408.3 310 66.8
Ca_05598_v3 Cicer arietinum L. HOM05D005476 ORTHO05D006886 1.1e-111 407.5 356 60.1
Migut.N00789 Erythranthe guttata HOM05D005476 ORTHO05D006886 1.1e-111 407.5 343 61.5
vmacro02961 Vaccinium macrocarpon HOM05D005476 ORTHO05D006886 1.1e-111 407.5 403 54.8
TPR.G5779 Trifolium pratense HOM05D005476 ORTHO05D006886 1.4e-111 407.1 356 58.4
PGR102G2402 Punica granatum HOM05D005476 ORTHO05D006886 2.4e-111 406.4 291 69.4
SGA_v2.0_scaffold146G36140 Striga asiatica HOM05D005476 ORTHO05D006886 1.2e-110 404.1 340 60.0
Aa31LG11G490 Aethionema arabicum HOM05D005476 ORTHO05D006886 1.6e-110 403.7 309 65.7
Thhalv10014005m.g Eutrema salsugineum HOM05D005476 ORTHO05D006886 1.6e-110 403.7 309 66.3
Phvul.008G261400 Phaseolus vulgaris HOM05D005476 ORTHO05D006886 1.6e-110 403.7 340 60.9
Nn2g11493 Nelumbo nucifera HOM05D005476 ORTHO05D006886 2.1e-110 403.3 289 67.8
Glyma.02G226600 Glycine max HOM05D005476 ORTHO05D006886 6.0e-110 401.7 350 59.1
Sp6g20420 Schrenkiella parvula HOM05D005476 ORTHO05D006886 1.3e-109 400.6 309 64.7
Carub.0008s1935 Capsella rubella HOM05D005476 ORTHO05D006886 1.7e-109 400.2 331 63.1
Rhsim13G0069500 Rhododendron simsii HOM05D005476 ORTHO05D006886 6.6e-109 398.3 360 58.6
ECA247G2000 Erigeron canadensis HOM05D005476 ORTHO05D006886 2.5e-108 396.4 320 61.9
unitig_8.g3687 Utricularia gibba HOM05D005476 ORTHO05D006886 2.5e-108 396.4 335 59.4
arahy.Tifrunner.gnm1.ann1.Q06W8H Arachis hypogaea HOM05D005476 ORTHO05D006886 3.3e-108 396.0 369 56.9
SalBow5G1841 Salvia bowleyana HOM05D005476 ORTHO05D006886 5.6e-108 395.2 329 61.1
BraA10t43679Z Brassica rapa HOM05D005476 ORTHO05D006886 9.6e-108 394.4 320 63.8
Medtr5g070350 Medicago truncatula HOM05D005476 ORTHO05D006886 4.7e-107 392.1 343 58.9
PSO801G0319 Papaver somniferum HOM05D005476 ORTHO05D006886 4.7e-107 392.1 348 59.8
A10p15540 Brassica napus HOM05D005476 ORTHO05D006886 6.2e-107 391.7 309 64.7
MBI14_g42907_MAGBIO Magnolia biondii HOM05D005476 ORTHO05D006886 1.8e-106 390.2 337 57.6
Psat2g058600 Pisum sativum HOM05D005476 ORTHO05D006886 3.1e-106 389.4 340 58.5
C09p50810 Brassica napus HOM05D005476 ORTHO05D006886 2.6e-105 386.3 309 64.4
BolC9t57941H Brassica oleracea HOM05D005476 ORTHO05D006886 1.3e-104 384.0 323 62.2
CsaV3_1G036180 Cucumis sativus L. HOM05D005476 ORTHO05D006886 2.9e-104 382.9 292 65.4
Sc06g0008450 Simmondsia chinensis HOM05D005476 ORTHO05D006886 8.4e-104 381.3 347 57.6
PSO339G1712 Papaver somniferum HOM05D005476 ORTHO05D006886 2.4e-103 379.8 312 61.9
unitig_22.g5210 Utricularia gibba HOM05D005476 ORTHO05D006886 1.2e-102 377.5 345 57.1
SHI19142 Sapria himalayana HOM05D005476 ORTHO05D006886 2.1e-102 376.7 333 58.6
BcaC04g19834 Brassica carinata HOM05D005476 ORTHO05D006886 5.1e-101 372.1 309 63.1
VMungo0647G0678 Vigna mungo HOM05D005476 ORTHO05D006886 1.1e-100 370.9 289 64.4
CDE04G1962 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.5e-100 370.5 299 60.2
SalBow8G4850 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.2e-97 360.9 329 56.8
ATR0618G050 Amborella trichopoda HOM05D005476 ORTHO05D006886 3.2e-95 352.8 324 56.2
HPP92_002247 Vanilla planifolia HOM05D005476 ORTHO05D006886 5.4e-95 352.1 326 55.2
Lj1A137G45 Lonicera japonica HOM05D005476 ORTHO05D006886 2.5e-92 343.2 326 57.4
Oeu013433.3 Olea europaea HOM05D005476 ORTHO05D006886 1.5e-89 334.0 272 61.0
Os03g0737701 Oryza sativa ssp. japonica HOM05D005476 ORTHO05D006886 4.2e-87 325.9 322 53.1
CDE02G0680 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.2e-86 324.3 295 55.3
Zm00001eb056490 Zea mays HOM05D005476 ORTHO05D006886 1.2e-81 307.8 298 52.3
Oeu000377.2 Olea europaea HOM05D005476 ORTHO05D006886 5.3e-74 282.3 262 56.9
AL1010U10010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 3.9e-69 266.2 186 71.5
arahy.Tifrunner.gnm1.ann1.70CJD0 Arachis hypogaea HOM05D005476 ORTHO05D006886 5.3e-66 255.8 230 58.7
Mapoly0060s0007 Marchantia polymorpha HOM05D005476 ORTHO05D006886 6.5e-64 248.8 289 45.0
AagrBONN_evm.TU.Sc2ySwM_362.363 Anthoceros agrestis HOM05D005476 ORTHO05D006886 3.2e-63 246.5 278 48.6
SEGI_26423 Sequoiadendron giganteum HOM05D005476 ORTHO05D006886 4.2e-63 246.1 289 45.7
Pp3c1_3930 Physcomitrium patens HOM05D005476 ORTHO05D006886 1.6e-62 244.2 303 43.2
SMO329G0019 Selaginella moellendorffii HOM05D005476 ORTHO05D006886 1.6e-62 244.2 269 46.8
CBR_g23861 Chara braunii HOM05D005476 ORTHO05D006886 5.3e-58 229.2 292 42.8
Pp3c7_18020 Physcomitrium patens HOM05D005476 ORTHO05D006886 1.2e-57 228.0 278 42.8
Gohir.D05G089750 Gossypium hirsutum HOM05D005476 ORTHO05D006886 1.6e-54 217.6 164 65.2
RcHm_v2.0_Chr6g0276161 Rosa chinensis HOM05D005476 ORTHO05D006886 8.2e-43 178.7 134 66.4
A03p12050 Brassica napus HOM05D005476 ORTHO05D006886 1.4e-42 177.9 165 56.4
RcHm_v2.0_Chr7g0201761 Rosa chinensis HOM05D005476 ORTHO05D006886 9.1e-42 175.3 134 64.9
HanXRQChr16g0507541 Helianthus annuus HOM05D005476 ORTHO05D006886 8.0e-30 135.6 92 69.6
BraA03t10517Z Brassica rapa HOM05D005476 ORTHO05D006886 1.6e-22 111.3 96 59.4
SalBow8G2493 Salvia bowleyana HOM05D005476 ORTHO05D006886 4.7e-22 109.8 170 42.4
RcHm_v2.0_Chr7g0242751 Rosa chinensis HOM05D005476 ORTHO05D006886 1.5e-20 104.8 86 61.6
C03p15890 Brassica napus HOM05D000062 ORTHO05D021669 1.7e-19 101.3 112 50.9
BolC3t14020H Brassica oleracea HOM05D000062 ORTHO05D006886 1.7e-19 101.3 112 50.9
Actinidia23243 Actinidia chinensis HOM05D005476 ORTHO05D006886 2.7e-17 94.0 74 67.6
arahy.Tifrunner.gnm1.ann1.Y3WSKM Arachis hypogaea HOM05D005476 ORTHO05D006886 1.3e-16 91.7 80 56.2
Pp3c11_9540 Physcomitrium patens HOM05D005476 ORTHO05D006886 1.9e-10 71.2 114 35.1
RcHm_v2.0_Chr6g0303391 Rosa chinensis HOM05D005476 ORTHO05D006886 4.1e-10 70.1 53 67.9
SalBow5G5594 Salvia bowleyana HOM05D005476 ORTHO05D006886 9.2e-10 68.9 71 50.7
SMO307G0055 Selaginella moellendorffii HOM05D000559 ORTHO05D000596 1.9e-07 61.2 316 23.7
ATR0691G298 Amborella trichopoda HOM05D000559 ORTHO05D000596 3.6e-06 57.0 126 31.7
Carub.0002s1247 Capsella rubella HOM05D000559 ORTHO05D000596 3.6e-06 57.0 130 35.4
HanXRQChr05g0151741 Helianthus annuus HOM05D004293 ORTHO05D005044 8.1e-06 55.8 123 35.8
Hma1.2p1_0050F.1_g029200 Hydrangea macrophylla HOM05D000559 ORTHO05D000596 8.1e-06 55.8 118 33.1


User provided reference genes

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