Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 4.8e-288 993.8 508 100.0
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 9.2e-247 856.7 513 85.8
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 7.8e-238 827.0 536 80.2
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 5.1e-221 771.2 515 77.5
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 2.0e-217 759.2 515 76.7
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 6.4e-216 754.2 518 76.8
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.2e-214 750.0 507 76.1
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 7.9e-214 747.3 510 75.7
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 6.7e-213 744.2 507 76.3
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 1.1e-212 743.4 516 75.2
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 2.5e-212 742.3 515 74.8
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 4.8e-211 738.0 500 77.8
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 1.8e-210 736.1 494 76.3
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.4e-210 735.7 494 76.1
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.1e-210 735.3 514 73.5
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 9.0e-210 733.8 508 75.0
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.2e-209 733.4 510 74.7
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.5e-209 733.0 499 75.8
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 2.6e-209 732.3 515 74.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 3.4e-209 731.9 519 73.4
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.4e-208 727.6 499 75.4
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.2e-206 723.4 515 73.6
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.2e-206 723.4 513 73.7
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 2.7e-206 722.2 516 73.4
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.7e-206 722.2 515 73.2
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 3.5e-206 721.8 515 72.8
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 3.0e-205 718.8 510 72.4
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.1e-204 716.8 516 73.1
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.5e-204 716.5 515 72.8
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.9e-204 716.1 515 72.0
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.3e-203 713.4 459 78.4
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 6.2e-203 711.1 490 74.1
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 8.2e-203 710.7 459 77.8
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 8.2e-203 710.7 516 71.5
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 9.0e-202 707.2 501 72.3
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 1.2e-201 706.8 510 71.2
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.0e-201 706.1 508 71.9
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 3.4e-201 705.3 515 70.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 3.4e-201 705.3 463 77.3
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.7e-200 703.0 500 71.4
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.2e-200 702.6 514 71.0
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 4.9e-200 701.4 517 72.1
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 4.2e-199 698.4 527 69.8
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 2.3e-197 692.6 484 72.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 3.0e-197 692.2 514 69.8
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 8.7e-197 690.6 493 71.8
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 9.7e-196 687.2 509 69.7
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.3e-195 686.8 458 75.3
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.0e-192 677.2 512 70.3
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 2.2e-192 676.0 460 73.9
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.8e-192 675.2 517 68.7
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 6.5e-192 674.5 516 69.4
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.0e-189 667.2 514 69.1
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.0e-189 667.2 514 69.1
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 2.3e-189 666.0 491 70.9
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.9e-189 665.2 498 70.5
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 5.7e-188 661.4 511 67.9
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.3e-187 660.2 446 73.5
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 7.7e-185 651.0 449 73.3
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.8e-184 648.7 453 74.6
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.1e-183 647.1 497 67.4
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.9e-183 646.4 452 73.0
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.1e-182 642.9 456 70.6
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 2.7e-182 642.5 459 71.7
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 3.6e-182 642.1 470 70.4
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.0e-181 640.6 512 65.6
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 9.7e-180 634.0 458 69.4
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.3e-179 633.6 474 69.0
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 3.7e-179 632.1 514 64.4
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.3e-179 631.3 458 69.2
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.7e-176 623.2 513 63.7
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.2e-176 622.9 479 66.6
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 6.5e-176 621.3 488 68.2
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.1e-175 620.5 515 62.3
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.4e-175 620.2 446 68.8
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.2e-174 617.1 419 74.7
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 1.6e-174 616.7 520 63.1
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.3e-173 612.8 506 62.8
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.3e-173 612.8 521 62.0
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 5.2e-173 611.7 517 62.1
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.1e-172 610.5 518 62.2
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.1e-172 610.5 522 62.6
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.4e-172 608.6 440 69.3
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.1e-170 604.0 512 62.5
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 9.1e-170 600.9 517 61.1
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 3.8e-168 595.5 457 65.2
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.1e-166 589.7 457 64.8
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 6.1e-166 588.2 521 59.7
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.8e-165 586.6 519 59.7
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 9.7e-164 580.9 511 61.8
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.7e-161 572.8 449 63.9
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 5.5e-159 565.1 446 63.0
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 4.0e-157 558.9 384 76.3
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.8e-154 550.1 401 71.1
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 3.4e-148 529.3 357 73.4
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 6.8e-141 505.0 422 60.0
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.7e-139 500.4 461 56.8
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.5e-137 492.7 430 57.9
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 9.2e-130 468.0 442 59.3
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 4.9e-123 445.7 298 76.5
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 3.2e-114 416.4 257 79.4
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.2e-113 414.5 409 55.5
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 2.6e-108 396.7 427 46.8
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 2.6e-92 343.6 456 42.5
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.7e-91 340.9 426 48.8
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 5.3e-85 319.3 220 73.6
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.0e-76 290.8 247 66.4
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 9.4e-66 255.4 429 36.4
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.1e-65 254.2 154 81.2
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 2.4e-61 240.7 421 34.9
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 7.0e-61 239.2 136 86.0
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 5.5e-50 203.0 176 58.5
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 2.7e-41 174.1 228 46.9
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 9.8e-39 165.6 228 43.9
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 8.0e-33 146.0 224 38.8
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 6.4e-30 136.3 130 56.2
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.8e-29 134.8 152 50.7
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.3e-26 123.6 111 61.3
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 3.9e-19 100.5 143 41.3


User provided reference genes

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