Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 8.2e-166 587.0 308 100.0
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 1.8e-149 532.7 297 92.3
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 5.9e-148 527.7 297 92.3
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 2.9e-147 525.4 296 90.9
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 2.5e-146 522.3 297 91.6
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 5.6e-146 521.2 297 89.9
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 1.0e-144 516.9 297 88.6
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 1.0e-144 516.9 297 89.2
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 1.4e-144 516.5 297 89.2
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 1.8e-144 516.2 297 88.9
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 3.0e-144 515.4 297 88.9
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 4.0e-144 515.0 297 88.9
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 4.0e-144 515.0 297 88.2
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 5.2e-144 514.6 297 88.6
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 6.8e-144 514.2 297 88.6
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 6.8e-144 514.2 297 88.9
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 8.9e-144 513.8 297 87.9
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 8.9e-144 513.8 297 88.6
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 8.9e-144 513.8 297 88.9
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 1.2e-143 513.5 297 88.2
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 1.2e-143 513.5 297 88.6
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 1.5e-143 513.1 297 88.6
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 1.5e-143 513.1 297 88.6
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 4.4e-143 511.5 297 88.2
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 5.8e-143 511.1 297 87.5
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 5.8e-143 511.1 297 87.9
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 5.8e-143 511.1 297 87.9
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 9.8e-143 510.4 297 87.2
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 2.9e-142 508.8 297 86.9
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 2.9e-142 508.8 297 87.9
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 86.5
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 88.6
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 86.9
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 86.2
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 3.7e-142 508.4 297 86.9
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 4.9e-142 508.1 297 87.9
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 4.9e-142 508.1 297 85.9
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 8.3e-142 507.3 297 85.9
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 1.1e-141 506.9 297 86.2
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 1.4e-141 506.5 297 88.6
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 1.8e-141 506.1 297 85.5
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 2.4e-141 505.8 297 87.9
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 4.1e-141 505.0 297 85.9
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 4.1e-141 505.0 297 86.2
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 5.4e-141 504.6 297 85.9
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 1.2e-140 503.4 297 85.9
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 1.2e-140 503.4 297 85.9
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 1.2e-140 503.4 297 87.2
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 1.2e-140 503.4 297 85.9
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.2e-140 503.4 297 86.2
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 1.6e-140 503.1 297 86.5
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.6e-140 503.1 297 86.2
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 2.0e-140 502.7 297 85.9
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 3.5e-140 501.9 297 85.9
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 3.5e-140 501.9 297 85.9
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 4.6e-140 501.5 297 85.9
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 4.6e-140 501.5 297 86.2
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 4.6e-140 501.5 297 86.5
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 6.0e-140 501.1 297 85.9
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 6.0e-140 501.1 297 86.5
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 1.0e-139 500.4 297 85.9
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 1.3e-139 500.0 297 86.5
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 1.7e-139 499.6 297 85.5
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 1.7e-139 499.6 297 85.5
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.7e-139 499.6 297 85.2
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 3.9e-139 498.4 297 85.9
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 5.0e-139 498.0 297 85.2
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 5.0e-139 498.0 297 85.2
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 5.0e-139 498.0 297 85.2
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 6.6e-139 497.7 297 85.2
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 6.6e-139 497.7 297 85.2
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 8.6e-139 497.3 320 80.9
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 1.1e-138 496.9 297 85.5
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 1.1e-138 496.9 297 86.2
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 1.1e-138 496.9 297 86.5
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 1.5e-138 496.5 297 85.2
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 1.5e-138 496.5 297 84.8
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 1.9e-138 496.1 306 83.7
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.9e-138 496.1 320 80.6
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.9e-138 496.1 320 80.6
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 2.5e-138 495.7 297 85.2
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 2.5e-138 495.7 330 79.4
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 3.3e-138 495.4 297 84.5
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 5.6e-138 494.6 297 84.5
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 5.6e-138 494.6 298 84.9
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 5.6e-138 494.6 298 84.9
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 7.3e-138 494.2 298 84.9
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 7.3e-138 494.2 297 84.2
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 7.3e-138 494.2 298 84.9
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 7.3e-138 494.2 297 85.2
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.1e-137 492.7 320 80.0
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.1e-137 492.7 320 80.0
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 2.8e-137 492.3 297 84.5
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 2.8e-137 492.3 308 81.5
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 3.6e-137 491.9 297 84.8
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 1.1e-136 490.3 297 83.2
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 2.3e-136 489.2 297 84.5
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 2.3e-136 489.2 297 84.5
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 3.1e-136 488.8 297 82.5
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 8.9e-136 487.3 297 81.8
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 3.4e-135 485.3 297 82.8
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 2.9e-134 482.3 297 82.2
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 4.9e-134 481.5 297 81.1
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 6.4e-134 481.1 307 82.4
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 1.1e-133 480.3 297 81.5
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 3.2e-133 478.8 297 82.2
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 1.2e-132 476.9 297 80.5
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 2.0e-132 476.1 278 87.8
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 1.7e-131 473.0 297 84.2
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 8.6e-131 470.7 297 80.1
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 4.7e-129 464.9 297 79.8
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 4.0e-128 461.8 297 79.5
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 7.1e-125 451.1 297 77.4
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 2.7e-124 449.1 324 73.1
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 7.8e-124 447.6 298 77.9
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 1.1e-122 443.7 297 79.1
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 4.3e-122 441.8 297 77.8
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 7.3e-122 441.0 298 74.2
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 9.5e-122 440.7 277 80.9
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 8.4e-118 427.6 246 91.5
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 1.6e-116 423.3 272 82.4
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 2.7e-116 422.5 344 67.7
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 1.3e-115 420.2 247 86.6
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 7.3e-114 414.5 289 72.0
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 1.6e-113 413.3 248 84.3
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 1.3e-110 403.7 301 73.4
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 3.1e-104 382.5 279 67.4
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 1.2e-103 380.6 298 67.1
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.2e-100 370.5 297 71.4
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 2.6e-95 352.8 303 61.4
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 6.0e-92 341.7 242 74.4
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 7.4e-90 334.7 197 87.8
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 1.4e-88 330.5 295 59.3
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 1.5e-79 300.4 197 79.7
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 1.5e-79 300.4 197 79.7
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 2.8e-73 279.6 162 85.2
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 8.0e-60 235.0 297 50.5
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 6.7e-59 231.9 287 43.9
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 3.6e-52 209.5 286 41.6
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 3.0e-51 206.5 154 72.7
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 4.8e-49 199.1 321 40.2
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 7.7e-47 191.8 178 60.7
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 9.4e-45 184.9 102 88.2
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 1.9e-37 160.6 161 61.5
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.9e-37 160.6 148 59.5
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 9.5e-37 158.3 213 46.9
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 6.1e-28 129.0 80 81.2
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 4.4e-18 96.3 75 68.0
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 1.4e-16 91.3 51 80.4
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 6.0e-15 85.9 51 76.5
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 3.9e-14 83.2 47 89.4
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 1.6e-12 77.8 90 48.9
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 1.6e-12 77.8 62 66.1
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 8.9e-11 72.0 42 73.8
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 8.3e-09 65.5 43 72.1


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