Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 5.5e-147 524.2 260 100.0
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 5.1e-116 421.4 237 86.9
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 5.4e-110 401.4 238 82.4
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.7e-108 396.4 234 82.1
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 1.5e-107 393.3 246 76.0
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 8.9e-105 384.0 245 77.6
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 2.6e-104 382.5 234 79.5
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.7e-103 379.8 234 78.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.9e-103 379.0 234 78.6
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 2.9e-103 379.0 234 79.1
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 3.8e-103 378.6 245 75.5
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.8e-103 378.6 245 77.1
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 4.9e-103 378.3 237 78.1
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 5.4e-102 374.8 239 75.7
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 9.3e-102 374.0 236 76.7
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 1.2e-101 373.6 235 77.0
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 1.2e-101 373.6 234 76.5
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.5e-101 372.1 234 78.2
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 6.0e-101 371.3 237 76.8
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.0e-100 370.5 236 77.1
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.0e-100 370.5 229 76.9
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 1.7e-100 369.8 235 75.3
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 1.7e-100 369.8 229 76.9
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 6.6e-100 367.9 235 75.3
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.1e-99 367.1 229 76.0
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 1.1e-99 367.1 236 73.7
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.5e-99 366.7 237 75.5
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 4.3e-99 365.2 259 67.6
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 7.3e-99 364.4 215 79.5
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 1.3e-98 363.6 214 80.4
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.3e-98 363.6 220 78.2
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.3e-98 363.6 232 75.4
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 3.6e-98 362.1 220 79.1
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 4.8e-98 361.7 214 79.9
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.8e-97 359.8 214 79.0
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.8e-97 359.8 223 77.6
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 2.4e-97 359.4 240 72.9
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 3.1e-97 359.0 233 74.2
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 9.0e-97 357.5 214 78.5
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 9.0e-97 357.5 233 74.7
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 1.2e-96 357.1 234 75.6
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 1.5e-96 356.7 226 75.7
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 2.0e-96 356.3 219 76.7
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 4.5e-96 355.1 227 74.0
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 7.6e-96 354.4 220 76.4
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.3e-95 353.6 231 72.7
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.7e-95 353.2 232 75.0
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 2.2e-95 352.8 218 76.6
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 3.8e-95 352.1 236 72.0
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 6.4e-95 351.3 225 72.9
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 1.4e-94 350.1 229 73.4
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.4e-94 350.1 231 72.7
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.4e-94 350.1 230 72.2
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.9e-94 349.7 236 70.8
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 1.9e-94 349.7 218 76.6
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 3.2e-94 349.0 236 70.8
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 3.2e-94 349.0 238 71.0
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 4.2e-94 348.6 228 72.8
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 9.3e-94 347.4 218 75.2
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 2.1e-93 346.3 237 71.3
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 4.6e-93 345.1 219 75.3
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 1.0e-92 344.0 228 71.9
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.0e-92 344.0 253 64.4
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.3e-92 343.6 218 76.1
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 1.3e-92 343.6 228 72.8
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.3e-92 342.8 227 71.8
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 2.3e-92 342.8 218 73.9
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 3.0e-92 342.4 230 72.2
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 5.1e-92 341.7 236 68.6
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 6.7e-92 341.3 234 67.1
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.9e-91 339.7 248 70.6
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 4.3e-91 338.6 231 68.8
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 4.3e-91 338.6 231 70.1
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 5.6e-91 338.2 233 68.7
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 9.6e-91 337.4 230 70.0
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 4.8e-90 335.1 218 77.1
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.1e-89 334.0 221 71.5
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 1.4e-89 333.6 232 68.5
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 4.0e-89 332.0 251 68.9
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 1.5e-88 330.1 227 71.4
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 2.0e-88 329.7 228 70.6
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 2.6e-88 329.3 233 68.7
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 2.6e-88 329.3 230 68.7
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 2.6e-88 329.3 230 68.7
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 5.8e-88 328.2 227 69.2
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 5.8e-88 328.2 225 69.8
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 9.9e-88 327.4 226 67.3
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.7e-87 326.6 214 72.9
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.7e-87 326.6 224 68.3
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 2.9e-87 325.9 230 68.3
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 8.4e-87 324.3 225 68.4
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 8.4e-87 324.3 225 68.4
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 8.4e-87 324.3 225 68.4
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 3.2e-86 322.4 224 69.6
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 3.2e-86 322.4 230 67.4
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 3.2e-86 322.4 216 70.8
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 4.2e-86 322.0 225 68.0
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 9.3e-86 320.9 212 70.8
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 9.3e-86 320.9 212 70.3
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 9.3e-86 320.9 212 70.8
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 1.6e-85 320.1 211 70.6
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.8e-84 316.6 221 67.9
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 5.6e-83 311.6 233 65.7
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.3e-82 310.5 219 69.4
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 1.6e-82 310.1 226 67.7
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 6.2e-82 308.1 239 64.0
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 2.2e-79 299.7 210 67.1
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 8.4e-79 297.7 233 63.1
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 1.4e-78 297.0 225 62.2
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 8.7e-76 287.7 209 65.1
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 5.7e-75 285.0 233 60.1
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.6e-74 283.5 194 69.1
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.2e-72 277.3 211 63.0
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 3.4e-72 275.8 210 61.9
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 7.6e-72 274.6 223 61.0
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.6e-69 266.9 219 58.9
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.8e-68 263.5 236 59.3
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 7.4e-67 258.1 211 57.8
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 1.7e-63 246.9 185 63.8
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 2.8e-58 229.6 163 68.1
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.2e-48 197.6 119 80.7
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 7.2e-46 188.3 144 62.5
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 3.0e-44 183.0 180 54.4
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 5.7e-43 178.7 213 44.6
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 5.0e-39 165.6 114 70.2
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 2.5e-30 136.7 170 42.4
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 4.2e-30 136.0 233 37.3
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 1.4e-28 131.0 98 63.3
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 8.9e-12 75.1 52 65.4
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 9.8e-11 71.6 48 66.7
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 6.6e-07 58.9 55 49.1


User provided reference genes

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