Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 8.1e-64 246.9 123 100.0
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 5.5e-36 154.5 129 66.7
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 2.6e-30 135.6 127 59.1
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 7.6e-30 134.0 137 56.2
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.0e-29 133.7 115 60.0
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.8e-29 131.7 115 60.0
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 1.1e-28 130.2 129 58.9
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 2.5e-28 129.0 115 57.4
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 3.5e-27 125.2 131 55.0
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.6e-27 124.8 115 56.5
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 6.0e-27 124.4 130 54.6
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 6.0e-27 124.4 131 57.3
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 3.0e-26 122.1 129 54.3
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 3.0e-26 122.1 129 54.3
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 3.9e-26 121.7 129 53.5
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.1e-26 121.3 129 53.5
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 8.7e-26 120.6 127 55.9
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 1.1e-25 120.2 128 53.1
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 1.9e-25 119.4 124 54.0
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.5e-25 119.0 129 52.7
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 3.3e-25 118.6 130 55.4
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 4.8e-24 114.8 123 54.5
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 8.2e-24 114.0 123 56.1
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 8.2e-24 114.0 128 49.2
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.1e-23 113.6 137 50.4
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.1e-23 113.6 137 50.4
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.4e-23 112.5 117 52.1
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 2.4e-23 112.5 127 55.1
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 3.1e-23 112.1 127 54.3
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 9.0e-23 110.5 130 51.5
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 1.5e-22 109.8 124 53.2
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 3.4e-22 108.6 138 52.2
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 5.9e-22 107.8 129 48.8
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 7.6e-22 107.5 110 54.5
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 2.9e-21 105.5 126 54.0
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 6.5e-21 104.4 117 47.9
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 6.5e-21 104.4 132 52.3
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 6.5e-21 104.4 130 51.5
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 6.5e-21 104.4 130 51.5
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 6.5e-21 104.4 130 51.5
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 6.5e-21 104.4 113 53.1
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 8.5e-21 104.0 110 53.6
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 1.1e-20 103.6 126 50.8
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.9e-20 102.8 133 45.1
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 3.2e-20 102.1 126 45.2
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 3.2e-20 102.1 130 49.2
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 4.2e-20 101.7 148 47.3
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 5.5e-20 101.3 133 48.1
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 9.3e-20 100.5 126 48.4
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 2.1e-19 99.4 129 48.8
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 2.7e-19 99.0 128 46.9
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 3.6e-19 98.6 127 48.0
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 6.1e-19 97.8 74 63.5
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 7.9e-19 97.4 129 45.0
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 7.9e-19 97.4 123 49.6
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 7.9e-19 97.4 134 44.8
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.1e-17 93.6 129 43.4
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 4.3e-17 91.7 131 44.3
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 5.7e-17 91.3 118 47.5
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 9.7e-17 90.5 121 46.3
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 9.7e-17 90.5 111 46.8
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 9.7e-17 90.5 128 43.8
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 1.3e-16 90.1 118 46.6
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 1.3e-16 90.1 112 48.2
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 1.3e-16 90.1 100 54.0
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 1.7e-16 89.7 128 48.4
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 1.7e-16 89.7 130 45.4
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 2.2e-16 89.4 80 55.0
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 2.2e-16 89.4 105 47.6
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 2.8e-16 89.0 86 58.1
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 6.3e-16 87.8 120 42.5
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.8e-15 86.3 120 43.3
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 3.1e-15 85.5 129 45.7
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 4.1e-15 85.1 116 43.1
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 5.3e-15 84.7 114 43.9
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 9.1e-15 84.0 129 45.0
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 1.2e-14 83.6 128 45.3
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.2e-14 83.6 115 41.7
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 2.0e-14 82.8 119 45.4
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 2.0e-14 82.8 132 40.9
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 2.6e-14 82.4 124 43.5
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 3.4e-14 82.0 86 47.7
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 7.7e-14 80.9 115 43.5
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 7.7e-14 80.9 86 45.3
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.7e-13 79.7 80 50.0
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 5.0e-13 78.2 129 42.6
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 8.5e-13 77.4 129 42.6
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 1.1e-12 77.0 95 48.4
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 1.4e-12 76.6 108 38.9
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 1.9e-12 76.3 121 42.1
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 5.5e-12 74.7 110 42.7
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 7.2e-12 74.3 144 38.9
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.2e-11 73.6 110 42.7
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 2.1e-11 72.8 139 43.2
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 6.7e-10 67.8 106 42.5
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 6.7e-10 67.8 54 57.4
CiPaw.10G142500 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.1e-09 67.0 33 87.9
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.5e-09 66.6 97 41.2
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 2.6e-09 65.9 65 52.3
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 5.7e-09 64.7 123 39.8
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.2e-08 62.8 104 41.3
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 2.8e-08 62.4 174 31.6
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.1e-07 60.5 54 50.0
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 1.4e-07 60.1 96 37.5
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.8e-07 59.7 52 48.1
CDE06G0073 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 4.1e-07 58.5 73 49.3
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 4.1e-07 58.5 96 36.5
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 5.3e-07 58.2 45 57.8
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 5.3e-07 58.2 45 57.8
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 5.3e-07 58.2 45 57.8
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 1.5e-06 56.6 96 35.4
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 2.6e-06 55.8 96 35.4
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 5.9e-06 54.7 50 52.0


User provided reference genes

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