Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 2.4e-59 231.9 111 100.0
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 3.9e-33 144.8 75 93.3
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 5.5e-27 124.4 75 81.3
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 1.2e-26 123.2 75 80.0
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 1.5e-24 116.3 76 71.1
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 2.5e-24 115.5 75 74.7
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 2.5e-24 115.5 75 73.3
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 5.6e-24 114.4 75 76.0
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 2.8e-23 112.1 75 73.3
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 6.2e-23 110.9 75 70.7
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 6.2e-23 110.9 75 70.7
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 6.2e-23 110.9 71 70.4
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 6.2e-23 110.9 75 73.3
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.1e-22 110.2 75 69.3
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 4.0e-22 108.2 76 69.7
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 5.3e-22 107.8 79 69.6
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 5.3e-22 107.8 76 72.4
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 9.0e-22 107.1 76 69.7
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 9.0e-22 107.1 78 64.1
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 9.0e-22 107.1 75 73.3
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 1.5e-21 106.3 75 68.0
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 1.5e-21 106.3 75 66.7
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 2.0e-21 105.9 75 70.7
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 2.0e-21 105.9 75 66.7
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 2.0e-21 105.9 75 65.3
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 2.0e-21 105.9 97 60.8
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 2.6e-21 105.5 106 55.7
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 2.6e-21 105.5 75 66.7
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 4.5e-21 104.8 75 69.3
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 4.5e-21 104.8 75 65.3
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 4.5e-21 104.8 100 59.0
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 4.5e-21 104.8 75 70.7
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 5.8e-21 104.4 75 72.0
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 5.8e-21 104.4 75 65.3
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 7.6e-21 104.0 75 69.3
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 7.6e-21 104.0 77 70.1
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 1.0e-20 103.6 75 69.3
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 1.0e-20 103.6 77 67.5
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 1.0e-20 103.6 72 66.7
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 1.3e-20 103.2 76 67.1
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 1.3e-20 103.2 76 67.1
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 1.3e-20 103.2 76 67.1
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 1.7e-20 102.8 76 67.1
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 2.2e-20 102.4 76 65.8
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 2.2e-20 102.4 75 72.0
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 2.2e-20 102.4 80 67.5
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 3.8e-20 101.7 77 67.5
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 4.9e-20 101.3 78 67.9
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 4.9e-20 101.3 80 66.2
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 4.9e-20 101.3 80 66.2
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 6.5e-20 100.9 114 54.4
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 8.4e-20 100.5 76 67.1
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 8.4e-20 100.5 82 61.0
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 8.4e-20 100.5 80 61.2
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 1.1e-19 100.1 76 65.8
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 1.1e-19 100.1 79 63.3
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 1.1e-19 100.1 81 60.5
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 1.1e-19 100.1 75 65.3
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 1.1e-19 100.1 76 65.8
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.4e-19 99.8 77 67.5
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 1.4e-19 99.8 77 66.2
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.9e-19 99.4 75 68.0
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 1.9e-19 99.4 75 68.0
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 1.9e-19 99.4 75 68.0
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 2.5e-19 99.0 75 65.3
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 2.5e-19 99.0 75 65.3
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 3.2e-19 98.6 75 65.3
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 9.3e-19 97.1 75 66.7
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 9.3e-19 97.1 75 66.7
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 9.3e-19 97.1 89 57.3
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 1.2e-18 96.7 84 57.1
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 1.2e-18 96.7 84 57.1
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 2.7e-18 95.5 89 57.3
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 2.7e-18 95.5 89 57.3
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 6.0e-18 94.4 87 60.9
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 7.9e-18 94.0 76 64.5
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 7.9e-18 94.0 76 64.5
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 1.0e-17 93.6 61 73.8
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 2.3e-17 92.4 100 50.0
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 3.0e-17 92.0 88 56.8
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 5.1e-17 91.3 75 58.7
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 1.1e-16 90.1 77 57.1
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 2.5e-16 89.0 75 61.3
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 3.3e-16 88.6 74 56.8
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 2.8e-15 85.5 52 76.9
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 1.4e-14 83.2 75 56.0
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 2.4e-14 82.4 51 76.5
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 4.1e-14 81.6 75 54.7
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 2.2e-12 75.9 124 38.7
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 2.9e-12 75.5 71 56.3
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 2.9e-12 75.5 75 52.0
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 1.4e-11 73.2 75 49.3
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 1.9e-11 72.8 42 76.2
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 3.2e-11 72.0 51 68.6
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 5.5e-11 71.2 125 39.2
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 9.4e-11 70.5 77 48.1
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 3.6e-10 68.6 71 50.7
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 4.6e-10 68.2 75 48.0
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 7.9e-10 67.4 60 55.0
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 1.0e-09 67.0 62 51.6
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.8e-09 66.2 84 45.2
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 2.3e-09 65.9 73 50.7
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 1.1e-08 63.5 39 79.5


User provided reference genes

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