Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 2.9e-73 278.5 141 100.0
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 5.5e-40 167.9 132 62.9
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 1.5e-37 159.8 129 67.4
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 1.1e-35 153.7 102 76.5
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 5.0e-33 144.8 104 70.2
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 3.6e-31 138.7 138 53.6
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 8.7e-30 134.0 136 50.0
QL08p037183 Quercus lobata HOM05D018442 ORTHO05D020347 4.8e-28 128.3 94 70.2
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 1.4e-27 126.7 133 43.6
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 6.9e-27 124.4 134 47.8
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 3.4e-26 122.1 142 48.6
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 3.4e-26 122.1 143 49.7
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 5.9e-26 121.3 143 49.0
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 5.9e-26 121.3 143 49.0
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 5.9e-26 121.3 138 50.7
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 7.7e-26 120.9 143 49.7
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 2.9e-25 119.0 156 42.9
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 5.0e-25 118.2 138 44.9
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 7.2e-24 114.4 138 50.7
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 2.7e-23 112.5 141 45.4
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 3.6e-23 112.1 127 48.8
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.4e-22 110.2 146 49.3
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 3.9e-22 108.6 140 42.1
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 5.1e-22 108.2 144 44.4
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 2.6e-21 105.9 144 45.1
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.3e-20 103.6 135 45.2
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 1.7e-20 103.2 135 41.5
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 2.2e-20 102.8 149 44.3
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 4.8e-20 101.7 146 43.8
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 2.4e-19 99.4 113 45.1
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 3.1e-19 99.0 130 43.8
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 6.9e-19 97.8 142 40.1
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 9.1e-19 97.4 142 40.1
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.2e-18 97.1 144 41.7
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 1.2e-18 97.1 136 39.0
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 1.5e-18 96.7 132 43.2
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 2.0e-18 96.3 148 38.5
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 2.6e-18 95.9 148 38.5
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 4.5e-18 95.1 152 40.8
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 4.5e-18 95.1 134 46.3
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.7e-17 93.2 142 40.8
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 2.2e-17 92.8 138 38.4
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 3.8e-17 92.0 124 44.4
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 6.5e-17 91.3 142 38.7
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 3.6e-15 85.5 106 49.1
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 3.6e-15 85.5 118 45.8
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 4.7e-15 85.1 116 44.8
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 5.2e-14 81.6 134 41.8
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 5.2e-14 81.6 132 35.6
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 6.7e-14 81.3 136 34.6
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 6.7e-14 81.3 136 37.5
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.1e-13 80.5 129 38.8
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 2.6e-13 79.3 139 36.0
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 2.6e-13 79.3 135 40.0
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 3.3e-13 79.0 122 38.5
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 3.3e-13 79.0 140 42.1
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 7.4e-13 77.8 128 37.5
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 7.4e-13 77.8 110 41.8
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 1.7e-12 76.6 87 44.8
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 1.7e-12 76.6 87 46.0
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 2.2e-12 76.3 137 40.1
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 2.2e-12 76.3 117 39.3
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 4.8e-12 75.1 136 38.2
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 4.8e-12 75.1 123 40.7
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 6.3e-12 74.7 136 38.2
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 8.2e-12 74.3 129 37.2
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 1.1e-11 73.9 80 45.0
COL.COLO4_34173 Corchorus olitorius HOM05D018442 ORTHO05D020347 1.1e-11 73.9 103 44.7
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 1.4e-11 73.6 136 38.2
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 2.4e-11 72.8 137 38.0
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 2.4e-11 72.8 132 37.9
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 2.4e-11 72.8 129 38.8
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 2.4e-11 72.8 148 31.8
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 3.1e-11 72.4 123 39.8
FvH4_7g06450 Fragaria vesca HOM05D007333 ORTHO05D008874 3.1e-11 72.4 105 42.9
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 3.1e-11 72.4 136 35.3
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 5.3e-11 71.6 117 39.3
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 5.3e-11 71.6 141 33.3
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 7.0e-11 71.2 147 34.7
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 7.0e-11 71.2 136 36.0
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 2.0e-10 69.7 129 36.4
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 2.0e-10 69.7 136 38.2
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 2.6e-10 69.3 120 36.7
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 2.6e-10 69.3 132 36.4
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 4.5e-10 68.6 122 41.0
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 4.5e-10 68.6 75 46.7
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 5.9e-10 68.2 116 36.2
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 7.7e-10 67.8 122 39.3
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.3e-09 67.0 119 37.8
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.3e-09 67.0 79 44.3
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.3e-09 67.0 79 44.3
Ciclev10029520m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.7e-09 66.6 108 40.7
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.7e-09 66.6 74 52.7
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 2.2e-09 66.2 116 37.9
Thecc.10G097400 Theobroma cacao HOM05D018442 ORTHO05D020347 2.9e-09 65.9 106 43.4
Ciclev10010649m.g Citrus clementina HOM05D007333 ORTHO05D008874 3.8e-09 65.5 107 41.1
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 3.8e-09 65.5 107 34.6
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 3.8e-09 65.5 138 37.0
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 6.5e-09 64.7 126 37.3
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 8.5e-09 64.3 42 69.0
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 3.2e-08 62.4 41 63.4
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 4.2e-08 62.0 79 43.0
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 2.7e-07 59.3 128 35.9
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 2.7e-07 59.3 78 37.2
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 2.7e-07 59.3 43 60.5


User provided reference genes

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