Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.5e-107 392.1 196 100.0
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 6.3e-95 350.9 194 87.1
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 3.0e-89 332.0 193 84.5
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 2.8e-87 325.5 196 81.1
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.1e-86 321.6 194 79.9
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.1e-83 313.5 196 77.6
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.1e-83 313.5 193 78.2
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 1.9e-83 312.8 194 76.3
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 2.5e-83 312.4 196 77.6
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 4.3e-83 311.6 192 76.0
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 7.3e-83 310.8 193 77.7
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 7.3e-83 310.8 193 77.7
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.2e-82 310.1 193 77.2
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 2.1e-82 309.3 192 76.0
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.1e-82 309.3 196 78.6
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.7e-82 308.1 193 77.2
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 4.7e-82 308.1 192 75.0
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.8e-81 306.2 193 76.7
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 6.8e-81 304.3 191 77.0
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 6.8e-81 304.3 192 77.6
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.2e-80 303.5 194 74.7
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.5e-80 303.1 192 78.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 1.7e-79 299.7 191 74.9
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.2e-79 299.3 191 75.9
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 6.4e-79 297.7 184 76.6
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.9e-78 296.2 189 75.7
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 2.4e-78 295.8 187 75.9
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 3.2e-78 295.4 184 77.7
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 5.4e-78 294.7 184 77.7
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 7.0e-78 294.3 188 74.5
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 9.2e-78 293.9 189 75.7
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 6.0e-77 291.2 191 73.8
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 5.0e-76 288.1 192 72.9
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 5.0e-76 288.1 188 74.5
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.9e-75 286.2 185 73.5
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.9e-75 286.2 189 72.0
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 5.6e-75 284.6 190 73.2
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.2e-74 283.5 188 73.9
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.6e-74 283.1 188 73.4
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.1e-74 282.7 178 79.8
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 6.2e-74 281.2 192 72.4
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 6.2e-74 281.2 195 71.3
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 8.0e-74 280.8 176 77.3
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.4e-73 280.0 192 69.8
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 2.3e-73 279.3 196 71.9
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 3.1e-73 278.9 181 75.1
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 4.0e-73 278.5 184 71.7
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 6.8e-73 277.7 188 74.5
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 8.9e-73 277.3 194 69.6
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 2.0e-72 276.2 191 69.6
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.0e-72 276.2 188 72.9
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 4.4e-72 275.0 189 69.3
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 5.8e-72 274.6 191 69.1
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 7.5e-72 274.2 191 69.1
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 7.5e-72 274.2 192 69.8
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.3e-71 273.5 225 63.6
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.3e-71 273.5 193 71.5
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.7e-71 273.1 182 70.9
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.7e-71 273.1 191 69.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.7e-71 273.1 191 69.6
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.2e-71 272.7 191 68.6
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 2.2e-71 272.7 191 69.1
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 2.2e-71 272.7 191 68.6
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.9e-71 272.3 189 68.8
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 2.9e-71 272.3 192 68.8
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 4.9e-71 271.6 181 72.9
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 4.9e-71 271.6 183 73.2
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.9e-71 271.6 192 70.8
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 8.3e-71 270.8 195 68.7
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.4e-70 270.0 191 68.1
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.4e-70 270.0 184 70.7
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.4e-70 269.2 191 68.6
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 3.2e-70 268.9 191 68.6
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 4.1e-70 268.5 184 70.1
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 5.4e-70 268.1 191 69.1
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 9.2e-70 267.3 192 68.8
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 6.0e-69 264.6 182 69.2
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 6.6e-68 261.2 183 69.4
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 5.6e-67 258.1 176 71.6
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 6.8e-65 251.1 191 68.1
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 6.8e-65 251.1 276 51.1
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.4e-62 243.4 174 70.1
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.6e-61 240.0 174 69.0
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 2.5e-59 232.6 192 60.9
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 2.8e-58 229.2 191 61.8
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.4e-57 226.1 192 64.6
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.9e-57 224.2 202 60.9
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.3e-55 220.3 133 78.2
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.2e-55 219.5 200 60.5
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 5.4e-54 214.9 137 78.1
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.1e-53 213.0 134 79.9
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.0e-52 210.7 180 64.4
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.5e-51 206.8 190 60.0
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.6e-50 203.4 128 78.9
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 3.6e-50 202.2 128 75.8
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.4e-49 199.5 143 67.1
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 6.4e-47 191.4 129 72.9
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.5e-45 185.7 119 76.5
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.9e-44 182.2 116 75.0
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 5.6e-43 178.3 145 66.2
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.4e-40 169.1 108 76.9
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 4.5e-40 168.7 155 54.8
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 4.9e-39 165.2 129 68.2
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 9.3e-38 161.0 177 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.2e-37 160.6 152 54.6
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.5e-37 159.1 108 75.0
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 5.1e-36 155.2 109 72.5
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.1e-34 147.9 98 75.5
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 4.0e-33 145.6 106 67.0
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 3.9e-28 129.0 91 65.9
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.8e-25 120.2 168 41.7
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.0e-23 114.4 152 44.1
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 8.2e-18 94.7 53 83.0
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 9.0e-17 91.3 170 37.1
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.7e-15 87.0 52 75.0
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 1.4e-14 84.0 58 65.5
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 1.8e-12 77.0 45 73.3
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.5e-11 73.9 41 78.0
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 7.4e-11 71.6 62 56.5
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 4.8e-10 68.9 48 62.5
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 2.4e-09 66.6 43 67.4
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 5.0e-07 58.9 50 54.0


User provided reference genes

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