Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 2.0e-140 502.3 233 100.0
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 2.5e-98 362.5 204 80.4
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.5e-95 353.2 208 79.3
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 2.2e-94 349.4 203 77.8
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 2.4e-85 319.3 205 71.2
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.6e-84 315.1 204 70.6
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.3e-82 308.9 204 72.5
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 4.3e-82 308.5 206 69.4
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 7.3e-82 307.8 204 71.6
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 9.5e-82 307.4 204 72.1
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 2.3e-80 302.8 206 68.9
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 2.3e-80 302.8 206 69.4
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.7e-78 296.6 205 67.8
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 3.2e-77 292.4 203 68.0
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 2.1e-76 289.7 216 62.0
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 2.1e-76 289.7 205 64.9
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 6.0e-76 288.1 206 65.5
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 6.0e-76 288.1 203 65.5
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 7.8e-76 287.7 201 65.7
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 7.8e-76 287.7 203 64.5
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.0e-75 285.8 207 64.7
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 6.6e-75 284.6 206 63.1
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 6.6e-75 284.6 206 62.6
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.1e-74 283.9 203 62.6
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 1.9e-74 283.1 201 67.2
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 3.3e-74 282.3 205 62.9
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 5.6e-74 281.6 203 64.0
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 9.6e-74 280.8 205 64.9
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 2.8e-73 279.3 204 62.3
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 3.6e-73 278.9 206 62.6
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 3.6e-73 278.9 201 64.2
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.7e-73 278.5 206 62.6
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 8.1e-73 277.7 201 64.7
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 1.4e-72 276.9 206 62.1
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 3.1e-72 275.8 204 61.8
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.1e-72 275.8 206 62.1
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 2.0e-71 273.1 203 62.1
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.6e-71 272.7 205 62.9
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 3.4e-71 272.3 203 62.6
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 4.4e-71 271.9 202 62.4
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 4.4e-71 271.9 204 60.3
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.8e-71 271.6 206 61.7
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.3e-70 270.4 203 62.1
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.3e-70 270.4 203 62.1
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.9e-70 269.2 206 61.2
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 3.8e-70 268.9 200 63.5
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 3.8e-70 268.9 199 61.8
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 4.9e-70 268.5 201 64.2
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 4.9e-70 268.5 204 60.3
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 8.4e-70 267.7 203 60.6
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.1e-69 267.3 201 63.2
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 1.0e-67 260.8 226 54.9
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 6.6e-67 258.1 206 59.7
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 8.7e-67 257.7 199 61.8
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.5e-66 256.1 221 59.7
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.1e-65 253.1 202 59.4
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 3.6e-65 252.3 197 61.4
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 4.8e-65 251.9 205 62.4
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 6.9e-64 248.1 261 49.0
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 1.5e-63 246.9 197 60.4
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 2.0e-63 246.5 209 56.9
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 2.6e-63 246.1 197 60.9
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 4.5e-63 245.4 203 58.6
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 5.8e-63 245.0 202 57.4
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 5.8e-63 245.0 195 61.0
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 1.3e-62 243.8 220 55.5
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.3e-62 243.8 198 60.1
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 1.7e-62 243.4 218 55.0
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 2.2e-62 243.0 197 59.4
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.9e-62 242.7 200 59.5
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 6.4e-62 241.5 202 57.9
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 8.4e-62 241.1 183 59.6
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 5.4e-61 238.4 203 57.1
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 6.0e-60 235.0 209 56.0
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 7.9e-60 234.6 220 52.7
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 6.7e-59 231.5 204 56.9
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.5e-58 230.3 197 54.3
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 1.3e-57 227.3 286 44.8
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 2.6e-55 219.5 204 54.4
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 2.6e-55 219.5 131 73.3
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.3e-54 217.2 214 54.2
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.3e-54 217.2 223 51.6
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.9e-54 216.1 179 60.9
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.4e-53 213.0 226 46.9
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.1e-53 211.5 226 46.9
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 4.0e-48 195.7 168 56.5
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 3.8e-46 189.1 187 51.3
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 7.9e-44 181.4 129 63.6
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 2.5e-42 176.4 200 48.0
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 4.3e-42 175.6 296 37.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 9.7e-42 174.5 126 63.5
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 5.3e-40 168.7 116 62.1
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 9.0e-40 167.9 177 50.3
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 2.0e-39 166.8 119 63.9
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 1.7e-38 163.7 111 64.0
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 2.9e-38 162.9 206 45.1
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 8.5e-38 161.4 192 43.2
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 4.2e-37 159.1 191 42.9
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.1e-32 144.4 139 48.9
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-26 124.4 214 32.7
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 2.8e-25 119.8 82 68.3
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 4.2e-21 105.9 133 39.8
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.7e-20 103.2 109 51.4
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 1.7e-14 84.0 185 29.7
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 7.5e-10 68.6 177 28.2
CiPaw.16G011700 Carya illinoinensis HOM05D001336 ORTHO05D034236 6.3e-09 65.5 34 82.4
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 3.5e-07 59.7 65 44.6
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 4.5e-07 59.3 37 70.3
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 4.5e-07 59.3 64 45.3
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 2.2e-06 57.0 39 61.5
Psat1g198480 Pisum sativum HOM05D000724 ORTHO05D012138 2.9e-06 56.6 92 37.0
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 8.5e-06 55.1 87 34.5


User provided reference genes

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