Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.2e-107 393.3 203 100.0
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.0e-71 273.9 189 78.3
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 5.6e-70 268.1 187 76.5
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 4.4e-67 258.5 193 72.5
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 3.3e-62 242.3 189 69.8
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 1.2e-61 240.4 188 68.6
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.8e-60 236.5 189 68.3
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.4e-60 236.1 183 69.9
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.2e-59 233.8 189 68.3
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 4.4e-59 231.9 189 67.7
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 5.8e-59 231.5 189 66.7
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 5.8e-59 231.5 189 66.7
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.3e-58 230.3 188 66.5
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.7e-58 229.9 189 66.1
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.9e-58 229.2 189 65.6
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 4.9e-58 228.4 189 65.6
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.1e-57 227.3 189 64.6
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 1.4e-57 226.9 189 65.1
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.4e-57 226.9 189 64.6
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 1.9e-57 226.5 191 67.5
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.9e-57 226.5 187 65.8
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.4e-57 226.1 189 65.1
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 3.2e-57 225.7 189 64.6
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 4.2e-57 225.3 189 62.4
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 4.2e-57 225.3 216 57.9
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 5.4e-57 224.9 189 65.1
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.7e-55 219.9 189 64.6
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 6.6e-55 218.0 190 62.6
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 1.1e-54 217.2 190 61.6
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.5e-54 216.9 188 62.2
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.5e-54 216.9 190 62.1
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.9e-54 216.5 188 63.8
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.3e-53 213.8 188 61.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 2.8e-53 212.6 159 67.3
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.8e-53 211.8 188 61.2
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 6.2e-53 211.5 188 61.7
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 8.1e-53 211.1 189 61.4
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.1e-52 210.7 182 63.2
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 3.1e-52 209.1 188 60.1
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 6.9e-52 208.0 190 60.5
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 9.0e-52 207.6 188 60.6
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 1.2e-51 207.2 153 70.6
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.0e-51 206.5 197 63.5
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.6e-51 206.1 188 60.1
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.8e-51 204.9 189 59.8
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.3e-50 203.8 190 56.3
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.3e-50 203.8 186 59.7
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.7e-50 203.4 175 65.7
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 3.8e-50 202.2 185 60.5
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 8.4e-50 201.1 231 54.1
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 2.4e-49 199.5 189 59.3
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 3.2e-49 199.1 189 60.8
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 4.2e-49 198.7 152 68.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 9.3e-49 197.6 185 60.0
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.1e-48 196.4 206 55.8
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 6.0e-48 194.9 191 55.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.0e-47 194.1 188 58.5
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.7e-47 193.4 188 56.9
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.7e-47 193.4 189 57.7
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 5.1e-47 191.8 200 54.5
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 7.3e-46 188.0 182 55.5
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 6.2e-45 184.9 190 55.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 3.1e-44 182.6 179 59.8
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 1.7e-42 176.8 148 59.5
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.9e-42 176.0 152 59.9
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 8.4e-42 174.5 185 51.4
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-39 166.0 202 51.0
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.6e-37 160.2 138 62.3
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 6.2e-37 158.3 129 65.9
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.2e-35 154.1 99 80.8
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 5.1e-31 138.7 106 70.8
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 5.1e-31 138.7 179 41.9
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 6.7e-31 138.3 194 39.7
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.1e-30 137.5 98 72.4
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 4.3e-30 135.6 186 40.3
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 2.1e-29 133.3 180 40.0
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 4.8e-29 132.1 100 65.0
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 3.5e-24 115.9 86 67.4
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 8.7e-23 111.3 111 55.0
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.6e-21 107.1 192 38.5
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 1.2e-19 100.9 93 60.2
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 2.6e-19 99.8 95 60.0
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.8e-18 95.9 97 55.7
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 8.5e-18 94.7 60 78.3
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 5.1e-15 85.5 70 64.3
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.1e-14 84.3 59 74.6
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.2e-11 74.3 163 25.2
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 2.6e-11 73.2 162 26.5
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 5.0e-10 68.9 70 54.3
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 2.3e-07 60.1 53 64.2
HanXRQChr11g0352371 Helianthus annuus HOM05D007678 ORTHO05D009658 3.3e-06 56.2 59 49.2
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 4.4e-06 55.8 65 52.3
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 9.7e-06 54.7 31 83.9


User provided reference genes

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