Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 4.7e-115 417.9 219 100.0
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 1.7e-93 346.3 214 84.1
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 6.8e-90 334.3 232 77.6
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.1e-83 312.8 214 77.6
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 1.6e-75 286.6 218 71.6
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 4.0e-74 282.0 220 72.7
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.4e-71 273.5 221 68.8
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.4e-71 272.7 221 68.8
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 3.2e-71 272.3 220 70.0
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 4.2e-71 271.9 221 68.8
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 9.3e-71 270.8 224 67.0
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.2e-70 270.4 208 66.3
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 1.6e-70 270.0 220 69.5
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.6e-70 270.0 222 64.9
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.6e-70 270.0 222 66.2
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 2.7e-70 269.2 209 69.9
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 6.0e-70 268.1 217 64.1
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 6.0e-70 268.1 221 67.0
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 7.9e-70 267.7 219 67.1
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 1.8e-69 266.5 219 64.8
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 2.3e-69 266.2 203 73.4
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 5.1e-69 265.0 208 66.8
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 1.1e-68 263.8 223 67.7
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 2.5e-68 262.7 193 74.1
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 2.5e-68 262.7 222 68.5
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 4.3e-68 261.9 220 66.4
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 5.6e-68 261.5 225 66.7
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 9.6e-68 260.8 223 64.6
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 9.6e-68 260.8 200 66.5
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 1.3e-67 260.4 211 65.9
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.6e-67 260.0 206 68.0
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.8e-67 259.2 223 64.6
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 2.8e-67 259.2 199 73.4
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 2.8e-67 259.2 199 75.9
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 3.7e-67 258.8 221 64.7
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 4.8e-67 258.5 218 63.8
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.1e-66 257.3 221 63.8
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.8e-66 256.5 221 63.8
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.8e-66 256.5 225 65.8
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 2.4e-66 256.1 223 64.1
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 3.1e-66 255.8 225 67.1
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 3.1e-66 255.8 195 72.3
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 9.0e-66 254.2 219 64.4
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.2e-65 253.8 218 62.4
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 3.4e-65 252.3 201 68.7
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 4.5e-65 251.9 221 61.5
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.3e-64 250.4 212 65.6
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.7e-64 250.0 216 66.2
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.7e-64 250.0 229 64.2
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 2.2e-64 249.6 220 62.7
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.2e-64 249.6 237 62.9
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 3.8e-64 248.8 229 64.2
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 3.8e-64 248.8 218 61.9
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 6.5e-64 248.1 193 67.9
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 6.5e-64 248.1 193 67.9
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 6.5e-64 248.1 220 62.3
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 6.5e-64 248.1 193 67.9
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 8.4e-64 247.7 240 60.4
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.1e-63 247.3 234 62.0
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 1.9e-63 246.5 219 64.8
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 2.5e-63 246.1 215 65.1
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 2.5e-63 246.1 229 62.9
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 7.1e-63 244.6 220 61.8
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 7.1e-63 244.6 218 61.9
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 7.1e-63 244.6 218 61.9
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 7.1e-63 244.6 219 61.2
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 9.3e-63 244.2 218 61.9
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.2e-62 243.8 199 64.8
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.2e-62 243.8 218 61.9
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.6e-62 243.4 218 61.9
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 2.1e-62 243.0 218 61.9
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 1.0e-61 240.7 221 58.4
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.8e-61 240.0 211 67.3
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 5.1e-61 238.4 186 68.8
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 8.7e-61 237.7 201 66.2
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 8.7e-61 237.7 161 75.8
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.1e-60 237.3 183 70.5
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.9e-60 236.5 187 66.8
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 1.9e-60 236.5 220 58.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 2.5e-60 236.1 187 66.8
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 1.3e-59 233.8 197 64.5
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.7e-59 232.3 189 65.1
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 4.8e-59 231.9 187 65.8
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 4.8e-59 231.9 190 66.8
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 1.4e-58 230.3 220 59.1
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 2.4e-58 229.6 190 64.2
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 6.9e-58 228.0 209 59.3
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 6.9e-58 228.0 264 53.0
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 2.0e-57 226.5 220 58.2
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 5.9e-57 224.9 193 61.1
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.0e-56 224.2 185 66.5
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 1.3e-56 223.8 225 56.9
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.7e-56 223.4 219 57.5
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.7e-56 223.4 171 70.2
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 2.2e-56 223.0 215 59.5
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 6.5e-56 221.5 230 56.1
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 8.5e-56 221.1 190 64.2
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.9e-55 219.9 199 63.3
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.8e-53 213.4 209 57.4
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.5e-52 210.3 173 67.6
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 3.7e-51 205.7 226 56.6
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 2.4e-50 203.0 162 64.2
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 4.1e-50 202.2 129 77.5
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 5.9e-49 198.4 130 77.7
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 3.8e-48 195.7 178 57.9
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 5.0e-48 195.3 130 73.8
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.9e-47 193.4 154 68.2
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 4.2e-47 192.2 116 81.0
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.6e-46 190.3 127 75.6
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 3.6e-46 189.1 138 76.1
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 7.9e-46 188.0 197 59.4
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 5.1e-45 185.3 150 66.7
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 5.3e-42 175.3 216 50.9
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.5e-41 173.7 169 53.3
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 2.6e-41 172.9 132 72.0
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.5e-41 172.2 150 59.3
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 3.6e-38 162.5 110 76.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.0e-37 159.5 177 51.4
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.9e-37 159.1 224 44.2
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 2.6e-36 156.4 174 54.0
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.0e-32 144.4 109 67.9
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 6.7e-29 131.7 105 61.0
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.6e-28 129.8 152 49.3
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 5.7e-28 128.6 163 49.1
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 2.0e-20 103.6 98 61.2
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 3.7e-19 99.4 150 42.7
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 8.3e-19 98.2 220 36.4
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 3.2e-15 86.3 104 50.0
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 2.8e-14 83.2 83 57.8
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 1.9e-07 60.5 50 74.0
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 5.6e-07 58.9 53 77.4
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.2e-06 57.8 45 62.2


User provided reference genes

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