Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G180200 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.5e-95 352.8 174 100.0
CiPaw.14G122000 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.7e-60 234.2 165 74.5
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.5e-43 177.6 155 58.1
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.6e-33 145.6 153 48.4
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.6e-33 145.6 150 50.0
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.6e-33 145.6 150 50.0
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.7e-33 145.2 153 48.4
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.0e-32 142.1 140 50.7
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-30 134.8 153 46.4
CiPaw.10G039300 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.1e-29 132.1 115 57.4
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 2.0e-23 113.2 143 47.6
vmacro11319 Vaccinium macrocarpon HOM05D010787 ORTHO05D011812 3.1e-21 105.9 235 31.9
CiPaw.09G138400 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.8e-19 99.0 113 45.1
Rhsim08G0121300 Rhododendron simsii HOM05D010787 ORTHO05D011812 3.6e-17 92.4 152 39.5
Rhsim01G0035000 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.8e-13 80.1 122 40.2
Rhsim01G0028500 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.1e-10 70.9 136 34.6
Rhsim01G0028600 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.1e-10 70.9 140 34.3
Rhsim08G0120900 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.1e-10 70.9 68 52.9
Rhsim01G0028900 Rhododendron simsii HOM05D018834 ORTHO05D011812 2.5e-10 69.7 140 33.6
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.4e-08 63.9 143 37.1
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.1e-08 62.8 148 31.1
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.5e-07 60.5 143 35.7
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 2.6e-07 59.7 130 40.0
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.4e-07 58.9 145 32.4
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 4.4e-07 58.9 129 36.4
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.3e-06 57.4 150 35.3
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.2e-06 56.6 138 32.6
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 2.9e-06 56.2 130 37.7
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.7e-06 55.8 137 32.8
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.7e-06 55.8 137 32.8
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 4.9e-06 55.5 135 32.6


User provided reference genes

Program Settings