Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 7.5e-121 437.2 219 100.0
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 7.8e-110 400.6 217 91.7
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 8.1e-107 390.6 219 86.3
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 5.2e-106 387.9 217 86.2
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 2.0e-105 386.0 220 87.3
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 2.4e-103 379.0 216 83.8
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.1e-103 378.3 219 85.4
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 4.1e-103 378.3 216 83.3
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 2.7e-102 375.6 217 82.9
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 3.5e-102 375.2 218 84.4
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.6e-102 374.8 219 84.9
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 6.0e-102 374.4 216 84.7
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 3.0e-101 372.1 216 82.4
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 3.9e-101 371.7 215 80.9
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 5.1e-101 371.3 219 84.9
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 6.6e-101 370.9 209 84.7
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.1e-100 370.2 216 81.9
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 1.5e-100 369.8 215 82.3
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 5.6e-100 367.9 213 83.1
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 7.3e-100 367.5 203 87.2
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.6e-99 366.3 216 83.3
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.1e-99 365.9 209 85.6
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 3.6e-99 365.2 219 80.8
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.1e-98 363.6 218 79.4
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.1e-98 363.6 218 79.8
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 4.0e-98 361.7 204 84.8
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 5.2e-98 361.3 216 80.6
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.5e-97 359.8 201 85.1
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.0e-97 359.4 216 80.1
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 2.6e-97 359.0 211 80.6
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 4.4e-97 358.2 215 81.4
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 7.6e-97 357.5 216 79.6
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 9.9e-97 357.1 215 79.1
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.2e-96 355.9 200 85.0
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 3.7e-96 355.1 204 83.8
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.1e-95 353.6 215 78.6
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.4e-95 353.2 216 82.9
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 4.1e-95 351.7 212 79.7
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 5.4e-95 351.3 220 78.2
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 4.6e-94 348.2 210 79.0
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 6.0e-94 347.8 206 82.0
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 7.8e-94 347.4 213 79.8
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.7e-93 346.3 215 76.7
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 3.9e-93 345.1 215 76.3
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 1.1e-92 343.6 215 75.8
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.1e-92 343.6 215 75.8
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.5e-92 343.2 215 75.8
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 4.3e-92 341.7 215 75.8
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 4.3e-92 341.7 219 76.7
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 4.3e-92 341.7 200 80.5
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 7.3e-92 340.9 200 80.5
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.6e-91 339.7 217 76.0
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 2.1e-91 339.3 218 74.8
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 2.8e-91 339.0 215 75.8
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 2.8e-91 339.0 215 74.9
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 2.8e-91 339.0 206 78.6
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 3.6e-91 338.6 215 74.9
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 4.7e-91 338.2 216 75.5
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 1.1e-90 337.0 205 77.6
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.4e-90 336.7 203 81.3
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.1e-90 335.5 201 80.1
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 6.8e-90 334.3 214 73.8
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.2e-89 333.6 201 79.6
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 1.2e-89 333.6 217 74.2
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 1.2e-89 333.6 217 74.2
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 1.5e-89 333.2 217 74.2
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.5e-89 333.2 200 80.0
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 2.6e-89 332.4 201 80.6
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 3.4e-89 332.0 200 79.0
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 4.4e-89 331.6 214 73.8
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 5.8e-89 331.3 217 73.7
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 5.8e-89 331.3 201 79.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 6.4e-88 327.8 201 79.6
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.1e-86 322.8 201 77.6
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 2.1e-86 322.8 207 75.4
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 4.6e-86 321.6 213 74.6
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.7e-85 319.7 200 77.5
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 3.0e-85 318.9 202 77.7
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 5.1e-85 318.2 223 70.0
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 2.1e-83 312.8 200 76.5
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.1e-82 310.5 208 71.6
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.4e-81 305.4 209 72.7
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 4.2e-79 298.5 207 70.0
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 7.1e-79 297.7 197 70.6
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 3.0e-77 292.4 197 69.5
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 3.9e-77 292.0 218 67.9
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.5e-76 289.3 200 71.0
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 9.6e-76 287.3 181 75.1
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 4.8e-75 285.0 172 79.7
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 1.8e-74 283.1 180 78.3
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 3.4e-73 278.9 248 59.7
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 3.8e-72 275.4 186 75.8
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.4e-71 273.5 173 75.1
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.5e-68 262.7 236 61.0
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 2.8e-67 259.2 147 85.7
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 2.5e-63 246.1 198 61.1
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 5.3e-58 228.4 137 79.6
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.0e-57 226.5 139 75.5
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 5.5e-55 218.4 211 53.1
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 5.5e-47 191.8 151 64.9
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.0e-45 186.0 108 82.4
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 2.6e-41 172.9 197 45.2
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 1.4e-39 167.2 110 77.3
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.2e-38 164.1 213 39.9
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.9e-37 159.1 91 81.3
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 2.0e-36 156.8 110 67.3
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.4e-34 150.6 81 86.4
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 6.5e-32 141.7 91 73.6
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.1e-30 135.2 218 36.7
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 5.7e-28 128.6 91 65.9
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 9.1e-26 121.3 77 75.3
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.7e-22 109.8 112 53.6
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 6.8e-21 105.1 71 73.2
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 4.4e-20 102.4 68 70.6
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 5.7e-20 102.1 62 72.6
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 5.4e-18 95.5 58 74.1
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.6e-17 94.0 59 74.6
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.6e-14 84.0 45 86.7
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.5e-09 66.2 41 75.6
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 4.3e-07 59.3 60 43.3


User provided reference genes

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