Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 2.3e-249 865.1 442 100.0
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 3.1e-174 615.5 418 76.8
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 9.4e-171 604.0 417 75.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.5e-144 516.9 423 66.0
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 2.7e-138 496.1 422 64.0
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 5.7e-136 488.4 425 61.9
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 1.7e-135 486.9 430 61.2
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 5.2e-129 465.3 417 61.6
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.3e-127 460.7 418 58.9
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 1.8e-126 456.8 425 60.0
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 5.0e-124 448.7 420 59.0
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.6e-124 448.4 422 58.8
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 3.6e-122 442.6 425 58.4
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 8.0e-122 441.4 416 59.1
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 8.0e-122 441.4 422 58.3
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 2.3e-121 439.9 426 59.2
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 2.3e-121 439.9 427 57.8
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.3e-121 439.9 420 57.9
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.5e-120 437.2 418 56.9
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 2.6e-120 436.4 389 60.4
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 4.9e-119 432.2 393 59.3
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.4e-119 431.8 422 57.6
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 8.3e-119 431.4 395 58.7
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 2.4e-118 429.9 424 56.8
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 8.6e-116 421.4 418 56.0
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.3e-115 418.3 366 60.9
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 9.5e-115 417.9 394 58.1
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 1.8e-113 413.7 425 54.4
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 3.1e-113 412.9 369 58.5
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 4.0e-113 412.5 409 56.2
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 5.2e-113 412.1 394 57.4
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 8.9e-113 411.4 368 58.4
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.2e-112 411.0 383 58.7
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 2.0e-112 410.2 425 52.7
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 2.0e-112 410.2 425 52.7
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.6e-112 409.8 381 58.8
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 2.6e-112 409.8 425 55.1
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.2e-111 406.8 372 58.9
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 3.2e-110 402.9 423 53.4
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 7.1e-110 401.7 360 58.9
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 6.0e-109 398.7 425 53.6
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 3.0e-108 396.4 379 55.4
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 3.9e-108 396.0 423 54.1
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 5.1e-108 395.6 423 53.7
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 4.7e-106 389.0 420 51.7
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 2.0e-104 383.6 405 48.9
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 3.4e-104 382.9 416 50.7
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 4.4e-104 382.5 395 53.4
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.3e-103 380.9 420 50.5
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 6.4e-103 378.6 374 57.2
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 3.2e-102 376.3 421 50.6
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 4.6e-101 372.5 338 59.2
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 2.5e-99 366.7 421 50.1
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 7.3e-99 365.2 418 48.3
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 9.6e-99 364.8 419 48.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 1.2e-98 364.4 422 49.8
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 8.9e-97 358.2 411 50.9
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 9.9e-96 354.8 424 49.1
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 4.2e-94 349.4 422 49.5
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 5.4e-94 349.0 366 49.2
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 1.6e-93 347.4 426 49.1
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 2.3e-92 343.6 418 46.9
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.5e-91 340.9 344 54.9
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 1.5e-91 340.9 358 51.1
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.8e-90 336.7 418 47.4
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 3.6e-90 336.3 322 56.5
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 4.8e-90 335.9 418 46.9
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 1.1e-89 334.7 332 53.9
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 1.4e-89 334.3 409 46.7
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.4e-89 334.3 387 51.4
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 8.4e-87 325.1 399 48.1
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 8.4e-87 325.1 399 48.6
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 1.4e-86 324.3 418 45.9
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.9e-86 323.9 399 47.4
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 9.3e-86 321.6 394 48.5
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 9.3e-86 321.6 394 48.5
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 6.0e-85 318.9 418 47.4
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.9e-84 316.2 394 47.5
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 5.1e-84 315.8 384 49.5
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.1e-83 314.7 377 48.3
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.5e-83 313.5 397 48.1
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 3.3e-83 313.2 341 52.5
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 9.6e-83 311.6 398 47.2
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.8e-82 310.1 378 48.4
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.6e-82 309.7 318 54.7
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 4.8e-82 309.3 418 45.2
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 3.1e-81 306.6 405 46.9
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 6.7e-76 288.9 365 46.6
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 1.6e-74 284.3 376 47.1
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 1.2e-72 278.1 285 49.5
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.2e-72 278.1 427 44.3
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 6.2e-66 255.8 307 49.5
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 4.1e-65 253.1 394 40.1
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 5.8e-64 249.2 307 47.9
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-62 244.6 242 55.8
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-62 244.6 242 55.8
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 5.5e-62 242.7 374 42.2
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 3.5e-61 240.0 247 53.8
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 5.7e-59 232.6 384 40.4
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 6.1e-53 212.6 367 39.8
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 5.3e-49 199.5 328 39.0
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 3.4e-48 196.8 276 43.1
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-44 184.9 149 63.1
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-44 184.9 149 63.1
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.2e-42 177.6 241 45.6
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.2e-40 171.8 240 44.2
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 1.0e-39 168.7 391 31.5
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.4e-38 162.2 143 57.3
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 4.0e-36 156.8 175 50.3
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 2.5e-30 137.5 132 50.0
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.2e-27 128.6 154 49.4
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 2.0e-24 117.9 207 41.5
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.0e-23 115.5 430 28.1
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.3e-23 115.2 134 50.7
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 6.5e-23 112.8 336 29.5
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 1.9e-22 111.3 188 42.6
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 1.6e-08 65.1 137 37.2
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 4.6e-08 63.5 65 56.9


User provided reference genes

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