Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 1.4e-101 372.9 177 100.0
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 3.5e-68 261.9 174 77.0
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 8.3e-54 214.2 180 61.1
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.1e-53 213.8 173 62.4
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.1e-53 211.8 170 64.7
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 4.1e-53 211.8 169 62.1
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.1e-53 211.8 158 65.8
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 9.2e-53 210.7 170 64.7
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 9.2e-53 210.7 169 63.9
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.2e-52 210.3 170 64.1
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 2.1e-52 209.5 142 72.5
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.5e-52 208.8 129 78.3
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 7.8e-52 207.6 134 74.6
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.3e-51 206.8 159 66.0
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.7e-51 206.5 159 66.0
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 5.1e-51 204.9 129 70.5
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.1e-51 204.9 159 65.4
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 5.1e-51 204.9 174 59.8
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-50 203.8 185 60.0
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.5e-50 203.4 169 63.3
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.9e-50 203.0 144 65.3
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 3.3e-50 202.2 121 77.7
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 7.3e-50 201.1 100 91.0
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 7.3e-50 201.1 171 59.6
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 9.6e-50 200.7 177 61.0
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.2e-49 200.3 142 66.9
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.6e-49 199.9 182 60.4
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 2.1e-49 199.5 171 59.1
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 3.6e-49 198.7 127 74.0
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.7e-49 198.4 175 57.7
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.8e-48 196.4 170 56.5
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 4.0e-48 195.3 174 58.0
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 5.2e-48 194.9 156 63.5
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 6.8e-48 194.5 119 75.6
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 6.8e-48 194.5 145 66.2
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 8.9e-48 194.1 171 60.8
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 8.9e-48 194.1 127 70.1
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 2.6e-47 192.6 151 62.9
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 2.6e-47 192.6 179 55.9
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 4.4e-47 191.8 158 60.8
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 4.4e-47 191.8 128 68.0
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 5.8e-47 191.4 120 71.7
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.3e-46 190.3 167 58.7
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 1.7e-46 189.9 162 59.9
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.7e-46 189.9 175 52.6
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 2.2e-46 189.5 147 61.9
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 2.9e-46 189.1 147 64.6
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 3.8e-46 188.7 104 79.8
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 3.8e-46 188.7 126 69.8
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 4.9e-46 188.3 110 75.5
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 4.9e-46 188.3 165 59.4
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 6.4e-46 188.0 125 73.6
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 8.4e-46 187.6 179 54.7
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.1e-45 187.2 161 58.4
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.4e-45 186.8 143 62.2
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.4e-45 186.8 155 61.3
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.4e-45 186.8 174 57.5
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.4e-45 186.0 166 56.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 2.4e-45 186.0 135 64.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 2.4e-45 186.0 128 68.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 7.1e-45 184.5 111 73.0
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 7.1e-45 184.5 126 66.7
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 9.3e-45 184.1 138 61.6
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.6e-44 183.3 159 58.5
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.7e-44 182.6 101 76.2
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 3.5e-44 182.2 170 54.7
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 6.0e-44 181.4 111 72.1
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.0e-43 180.6 128 66.4
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.0e-43 180.6 131 65.6
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.3e-43 180.3 123 67.5
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 2.3e-43 179.5 116 68.1
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 2.3e-43 179.5 116 71.6
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 5.1e-43 178.3 104 76.0
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 6.6e-43 177.9 170 50.6
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 6.6e-43 177.9 150 60.7
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 8.7e-43 177.6 154 58.4
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 6.2e-41 171.4 129 60.5
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 3.1e-40 169.1 111 66.7
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.2e-38 162.9 132 59.8
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.6e-36 156.8 155 52.3
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.6e-36 156.8 132 55.3
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 2.7e-36 156.0 121 59.5
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 3.0e-35 152.5 118 59.3
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.1e-34 150.6 139 54.7
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.9e-34 149.8 129 56.6
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.3e-33 147.1 108 63.0
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.4e-32 143.7 110 55.5
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.4e-29 132.9 101 56.4
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 6.5e-22 108.2 60 78.3
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.3e-19 99.8 54 83.3
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 5.1e-19 98.6 101 51.5
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 2.5e-18 96.3 123 45.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 5.3e-16 88.6 82 53.7
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.1e-13 80.9 45 80.0
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 3.2e-13 79.3 45 77.8
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.2e-06 56.6 45 60.0


User provided reference genes

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