Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G158500 Carya illinoinensis HOM05D033165 ORTHO05D012661 7.5e-42 174.1 138 100.0
CiPaw.13G157000 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.9e-29 132.9 125 91.2
CiPaw.13G155400 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.1e-24 117.1 117 91.5
CiPaw.13G158200 Carya illinoinensis HOM05D000009 ORTHO05D012661 5.4e-24 114.8 116 91.4
CiPaw.13G156100 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.0e-22 110.5 110 98.2
CiPaw.13G156300 Carya illinoinensis HOM05D000009 ORTHO05D000008 8.9e-19 97.4 121 77.7
CiPaw.13G157400 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.9e-17 92.4 121 72.7
CiPaw.13G155600 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.4e-17 91.3 46 93.5
CiPaw.13G157900 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.4e-17 91.3 46 93.5
CiPaw.13G156500 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.7e-15 85.9 46 87.0
Haze_02668 Corylus avellana HOM05D033165 ORTHO05D012661 7.8e-15 84.3 118 79.7
QL04p003342 Quercus lobata HOM05D000009 ORTHO05D000008 5.6e-13 78.2 122 72.1
QL04p006215 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-11 73.2 119 72.3
Eucgr.H02956 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.3e-11 72.8 119 71.4
QL04p006095 Quercus lobata HOM05D000009 ORTHO05D000008 4.0e-11 72.0 116 70.7
QL04p001460 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-10 70.5 118 73.7
CiPaw.14G050200 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.6e-10 69.3 44 70.5
Psat2g139160 Pisum sativum HOM05D000009 ORTHO05D010993 7.5e-10 67.8 112 71.4
QL03p054138 Quercus lobata HOM05D000009 ORTHO05D000008 1.7e-09 66.6 123 70.7
QL03p054181 Quercus lobata HOM05D000009 ORTHO05D000008 2.2e-09 66.2 118 55.1
QL10p040100 Quercus lobata HOM05D000009 ORTHO05D000008 3.7e-09 65.5 125 70.4
QL04p003301 Quercus lobata HOM05D000009 ORTHO05D000008 4.9e-09 65.1 118 72.0
AUR62009409 Chenopodium quinoa HOM05D000009 ORTHO05D000008 8.3e-09 64.3 121 58.7
QL04p000042 Quercus lobata HOM05D000009 ORTHO05D000008 8.3e-09 64.3 118 72.0
Haze_18896 Corylus avellana HOM05D033165 ORTHO05D012661 1.1e-08 63.9 112 75.9
QL04p041177 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-08 63.9 45 64.4
QL04p041212 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-08 63.9 45 62.2
QL93p0177_0018 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-08 63.9 42 64.3
QL04p008793 Quercus lobata HOM05D000009 ORTHO05D000008 1.4e-08 63.5 118 50.8
Ah.10g038650 Amaranthus hybridus HOM05D000009 ORTHO05D000008 1.9e-08 63.2 121 55.4
Ah.12g054540 Amaranthus hybridus HOM05D000009 ORTHO05D000008 1.9e-08 63.2 126 51.6
QL04p006184 Quercus lobata HOM05D000009 ORTHO05D000008 3.2e-08 62.4 116 73.3
EL10Ac8g20491 Beta vulgaris HOM05D000009 ORTHO05D031687 4.1e-08 62.0 121 66.9
QL93p0049_0291 Quercus lobata HOM05D000009 ORTHO05D000008 4.1e-08 62.0 43 65.1
QL93p0049_0319 Quercus lobata HOM05D000009 ORTHO05D000008 4.1e-08 62.0 45 64.4
AUR62018735 Chenopodium quinoa HOM05D000009 ORTHO05D000008 7.1e-08 61.2 118 46.6
QL04p021333 Quercus lobata HOM05D003977 ORTHO05D004536 7.1e-08 61.2 116 70.7
QL93p0049_0420 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-07 60.1 43 65.1
Psat2g139280 Pisum sativum HOM05D000009 ORTHO05D010993 2.7e-07 59.3 127 63.8
QL04p021406 Quercus lobata HOM05D000009 ORTHO05D000008 2.7e-07 59.3 116 69.8
QL07p029312 Quercus lobata HOM05D000009 ORTHO05D000008 2.7e-07 59.3 116 69.8
QL07p029461 Quercus lobata HOM05D000009 ORTHO05D000008 2.7e-07 59.3 116 69.8
QL07p029551 Quercus lobata HOM05D000009 ORTHO05D000008 2.7e-07 59.3 116 69.8
QL93p0049_0253 Quercus lobata HOM05D000009 ORTHO05D012661 2.7e-07 59.3 116 69.8
QL04p008677 Quercus lobata HOM05D000009 ORTHO05D000008 4.6e-07 58.5 134 54.5
QL04p008632 Quercus lobata HOM05D000009 ORTHO05D000008 7.8e-07 57.8 118 53.4
Dinv07433 Davidia involucrata HOM05D000009 ORTHO05D000008 1.3e-06 57.0 111 32.4
EL10Ac2g04356 Beta vulgaris HOM05D000009 ORTHO05D000008 1.7e-06 56.6 119 68.9
Eucgr.H02950 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.7e-06 56.6 122 68.9
FAN05G4974 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.3e-06 56.2 109 54.1
Ah.07g208450 Amaranthus hybridus HOM05D000009 ORTHO05D000008 3.0e-06 55.8 128 62.5
arahy.Tifrunner.gnm1.ann1.G73P59 Arachis hypogaea HOM05D000009 ORTHO05D010993 3.0e-06 55.8 118 53.4
arahy.Tifrunner.gnm1.ann1.M4G710 Arachis hypogaea HOM05D000009 ORTHO05D010993 3.0e-06 55.8 118 53.4
AUR62017772 Chenopodium quinoa HOM05D000009 ORTHO05D021208 3.0e-06 55.8 116 70.7
QL04p001321 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-06 55.8 41 61.0
QL10p062698 Quercus lobata HOM05D000009 ORTHO05D000008 3.9e-06 55.5 44 56.8
RcHm_v2.0_Chr4g0417041 Rosa chinensis HOM05D000009 ORTHO05D000008 3.9e-06 55.5 112 46.4
Haze_02647 Corylus avellana HOM05D000009 ORTHO05D015085 5.1e-06 55.1 35 68.6
QL93p0049_0383 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-06 55.1 43 58.1
CANSAT80G0508 Cannabis sativa HOM05D000009 ORTHO05D012834 6.6e-06 54.7 125 31.2
Eucgr.H02952 Eucalyptus grandis HOM05D000009 ORTHO05D000008 6.6e-06 54.7 119 68.9
FAN09G1611 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.6e-06 54.7 112 29.5
Sc08g0001970 Simmondsia chinensis HOM05D000009 ORTHO05D000008 6.6e-06 54.7 124 42.7
CANSAT80G0379 Cannabis sativa HOM05D000009 ORTHO05D012834 8.6e-06 54.3 113 32.7
Sc19g0003050 Simmondsia chinensis HOM05D000009 ORTHO05D021208 8.6e-06 54.3 125 59.2
TPR.G19458 Trifolium pratense HOM05D000009 ORTHO05D010993 8.6e-06 54.3 118 67.8
GSVIVG01032141001 Vitis vinifera HOM05D000009 ORTHO05D000008 8.6e-06 54.3 52 51.9


User provided reference genes

Program Settings