Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G158100 Carya illinoinensis HOM05D002672 ORTHO05D002887 1.3e-78 296.2 143 100.0
CiPaw.09G001400 Carya illinoinensis HOM05D002672 ORTHO05D002887 3.1e-43 178.7 118 76.3
CiPaw.10G000600 Carya illinoinensis HOM05D002672 ORTHO05D002887 1.6e-42 176.4 118 72.9
Cpa.g.sc51.101 Carica papaya HOM05D002672 ORTHO05D002887 2.3e-41 172.6 118 70.3
Haze_11185 Corylus avellana HOM05D002672 ORTHO05D002887 1.5e-40 169.9 118 69.5
Haze_11190 Corylus avellana HOM05D002672 ORTHO05D002887 1.5e-40 169.9 118 69.5
TWI74G0403 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 5.5e-40 167.9 118 68.6
GSVIVG01033390001 Vitis vinifera HOM05D002672 ORTHO05D002887 7.2e-40 167.5 105 75.2
Glyma.19G110500 Glycine max HOM05D002672 ORTHO05D002887 1.6e-39 166.4 118 67.8
Psat3g089120 Pisum sativum HOM05D002672 ORTHO05D002887 1.6e-39 166.4 114 69.3
Nn2g15174 Nelumbo nucifera HOM05D002672 ORTHO05D002887 2.8e-39 165.6 118 66.9
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 3.6e-39 165.2 105 75.2
Dinv37010 Davidia involucrata HOM05D002672 ORTHO05D002887 3.6e-39 165.2 118 67.8
Glyma.16G041900 Glycine max HOM05D002672 ORTHO05D002887 3.6e-39 165.2 105 73.3
Phvul.001G109900 Phaseolus vulgaris HOM05D002672 ORTHO05D002887 3.6e-39 165.2 136 61.8
TWI77G0420 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 3.6e-39 165.2 118 68.6
Duzib106G0634 Durio zibethinus HOM05D002672 ORTHO05D002887 4.7e-39 164.9 118 68.6
TAR623G0799 Trochodendron aralioides HOM05D002672 ORTHO05D002887 4.7e-39 164.9 118 67.8
Ca_08259_v3 Cicer arietinum L. HOM05D002672 ORTHO05D002887 6.1e-39 164.5 110 70.0
VMungo1383G1105 Vigna mungo HOM05D002672 ORTHO05D002887 8.0e-39 164.1 118 67.8
Actinidia30558 Actinidia chinensis HOM05D002672 ORTHO05D002887 3.0e-38 162.2 118 65.3
FAN23G2462 Fragaria x ananassa HOM05D002672 ORTHO05D002887 3.0e-38 162.2 118 66.9
MD14G1002200 Malus domestica HOM05D002672 ORTHO05D002887 3.0e-38 162.2 118 65.3
Thecc.05G293600 Theobroma cacao HOM05D002672 ORTHO05D002887 3.0e-38 162.2 118 66.9
FAN26G1451 Fragaria x ananassa HOM05D002672 ORTHO05D002887 4.0e-38 161.8 118 66.9
RcHm_v2.0_Chr3g0497201 Rosa chinensis HOM05D002672 ORTHO05D002887 4.0e-38 161.8 119 67.2
Atru.chr2.1366 Acer truncatum HOM05D002672 ORTHO05D002887 5.2e-38 161.4 118 67.8
CSS0007216 Camellia sinensis var. sinensis HOM05D002672 ORTHO05D002887 6.8e-38 161.0 118 65.3
FAN06G3050 Fragaria x ananassa HOM05D003775 ORTHO05D004314 6.8e-38 161.0 118 66.1
Prupe.7G003300 Prunus persica HOM05D002672 ORTHO05D002887 6.8e-38 161.0 118 65.3
FAN03G1589 Fragaria x ananassa HOM05D002672 ORTHO05D002887 8.9e-38 160.6 118 66.1
TPR.G5877 Trifolium pratense HOM05D002672 ORTHO05D002887 8.9e-38 160.6 114 66.7
Duzib177G0497 Durio zibethinus HOM05D002672 ORTHO05D002887 1.2e-37 160.2 119 68.1
Ciclev10021354m.g Citrus clementina HOM05D002672 ORTHO05D002887 1.5e-37 159.8 118 66.1
Gohir.A11G258600 Gossypium hirsutum HOM05D002672 ORTHO05D002887 1.5e-37 159.8 119 67.2
Aqoxy1G00499 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 2.6e-37 159.1 116 65.5
arahy.Tifrunner.gnm1.ann1.53N7TD Arachis hypogaea HOM05D002672 ORTHO05D002887 3.4e-37 158.7 118 65.3
arahy.Tifrunner.gnm1.ann1.6BXT91 Arachis hypogaea HOM05D002672 ORTHO05D002887 3.4e-37 158.7 118 65.3
arahy.Tifrunner.gnm1.ann1.SA2BAT Arachis hypogaea HOM05D002672 ORTHO05D002887 3.4e-37 158.7 118 65.3
FvH4_7g02040 Fragaria vesca HOM05D002672 ORTHO05D002887 3.4e-37 158.7 118 65.3
Lj1g0022931 Lotus japonicus HOM05D002672 ORTHO05D002887 3.4e-37 158.7 119 65.5
Sp7g07100 Schrenkiella parvula HOM05D002672 ORTHO05D002887 3.4e-37 158.7 116 69.0
Oeu003210.1 Olea europaea HOM05D002672 ORTHO05D002887 4.4e-37 158.3 118 64.4
Aqoxy2G00200 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 7.5e-37 157.5 116 65.5
BcaB06g26927 Brassica carinata HOM05D002672 ORTHO05D002887 7.5e-37 157.5 116 68.1
Medtr7g085450 Medicago truncatula HOM05D002672 ORTHO05D002887 7.5e-37 157.5 114 65.8
Gorai.007G288500 Gossypium raimondii HOM05D002672 ORTHO05D002887 9.8e-37 157.1 119 66.4
Lalb_Chr14g0364451 Lupinus albus HOM05D002672 ORTHO05D002887 9.8e-37 157.1 118 63.6
THA.LOC104823784 Tarenaya hassleriana HOM05D002672 ORTHO05D002887 9.8e-37 157.1 118 67.8
Potri.019G033800 Populus trichocarpa HOM05D002672 ORTHO05D002887 1.3e-36 156.8 119 63.0
Rhsim03G0001100 Rhododendron simsii HOM05D002672 ORTHO05D002887 1.3e-36 156.8 118 64.4
FvH4_1g28050 Fragaria vesca HOM05D002672 ORTHO05D002887 1.7e-36 156.4 118 65.3
vmacro12572 Vaccinium macrocarpon HOM05D002672 ORTHO05D002887 2.2e-36 156.0 105 69.5
Aa31LG2G1980 Aethionema arabicum HOM05D002672 ORTHO05D002887 2.8e-36 155.6 118 66.9
Potri.013G058800 Populus trichocarpa HOM05D002672 ORTHO05D002887 2.8e-36 155.6 121 65.3
FAN01G0886 Fragaria x ananassa HOM05D003775 ORTHO05D004314 3.7e-36 155.2 104 69.2
PSO063G3245 Papaver somniferum HOM05D002672 ORTHO05D002887 3.7e-36 155.2 118 65.3
A04p09620 Brassica napus HOM05D002672 ORTHO05D002887 4.9e-36 154.8 116 67.2
BraA04t16621Z Brassica rapa HOM05D002672 ORTHO05D002887 4.9e-36 154.8 116 67.2
Thhalv10003462m.g Eutrema salsugineum HOM05D002672 ORTHO05D002887 6.3e-36 154.5 116 66.4
Sed0007674 Sechium edule HOM05D002672 ORTHO05D002887 6.3e-36 154.5 105 67.6
PSO339G0446 Papaver somniferum HOM05D002672 ORTHO05D002887 8.3e-36 154.1 118 65.3
Sabra13G0052300 Salix brachista HOM05D002672 ORTHO05D002887 8.3e-36 154.1 119 63.9
BcaC02g09472 Brassica carinata HOM05D002672 ORTHO05D002887 1.1e-35 153.7 116 66.4
C04p43190 Brassica napus HOM05D002672 ORTHO05D002887 1.1e-35 153.7 116 66.4
BolC4t25896H Brassica oleracea HOM05D002672 ORTHO05D002887 1.1e-35 153.7 116 66.4
CANSAT78G2220 Cannabis sativa HOM05D002672 ORTHO05D002887 1.1e-35 153.7 119 63.0
SGA_v2.0_scaffold59G20726 Striga asiatica HOM05D002672 ORTHO05D002887 1.1e-35 153.7 105 67.6
COL.COLO4_13611 Corchorus olitorius HOM05D002672 ORTHO05D002887 1.8e-35 152.9 120 65.0
Lj1A1137T84 Lonicera japonica HOM05D002672 ORTHO05D002887 1.8e-35 152.9 116 63.8
MSTRG.27677 Avicennia marina HOM05D002672 ORTHO05D002887 2.4e-35 152.5 105 66.7
Cc00_g05140 Coffea canephora HOM05D002672 ORTHO05D002887 2.4e-35 152.5 106 69.8
Gohir.D11G268700 Gossypium hirsutum HOM05D002672 ORTHO05D002887 2.4e-35 152.5 119 65.5
MELO3C008797.2 Cucumis melo HOM05D002672 ORTHO05D002887 4.1e-35 151.8 105 66.7
CsaV3_4G013320 Cucumis sativus L. HOM05D002672 ORTHO05D002887 4.1e-35 151.8 105 66.7
AT1G54390 Arabidopsis thaliana HOM05D002672 ORTHO05D002887 5.4e-35 151.4 116 65.5
CANSAT78G2266 Cannabis sativa HOM05D002672 ORTHO05D002887 5.4e-35 151.4 119 62.2
CARHR055500 Cardamine hirsuta HOM05D002672 ORTHO05D002887 9.2e-35 150.6 116 65.5
AUR62032684 Chenopodium quinoa HOM05D002672 ORTHO05D002887 1.2e-34 150.2 107 68.2
ClCG04G005270 Citrullus lanatus HOM05D002672 ORTHO05D002887 1.2e-34 150.2 105 65.7
Sabra19G0041700 Salix brachista HOM05D002672 ORTHO05D002887 1.6e-34 149.8 112 62.5
AL1G64630 Arabidopsis lyrata HOM05D002672 ORTHO05D002887 2.0e-34 149.4 116 65.5
HanXRQChr01g0024701 Helianthus annuus HOM05D002672 ORTHO05D002887 2.7e-34 149.1 117 61.5
Eucgr.A02091 Eucalyptus grandis HOM05D002672 ORTHO05D002887 3.5e-34 148.7 120 65.0
AUR62032064 Chenopodium quinoa HOM05D002672 ORTHO05D002887 7.8e-34 147.5 107 66.4
Peaxi162Scf00003g04833 Petunia axillaris HOM05D002672 ORTHO05D002887 7.8e-34 147.5 105 67.6
PGR142G0008 Punica granatum HOM05D002672 ORTHO05D002887 1.0e-33 147.1 106 64.2
Sc19g0006480 Simmondsia chinensis HOM05D002672 ORTHO05D002887 1.7e-33 146.4 120 60.8
EL10Ac3g06813 Beta vulgaris HOM05D002672 ORTHO05D002887 2.9e-33 145.6 120 60.0
CDE10G0711 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 2.9e-33 145.6 105 63.8
Manes.08G150000 Manihot esculenta HOM05D002672 ORTHO05D002887 2.9e-33 145.6 119 61.3
Carub.0002s0957 Capsella rubella HOM05D002672 ORTHO05D002887 3.8e-33 145.2 116 63.8
DCAR_016869 Daucus carota HOM05D002672 ORTHO05D002887 5.0e-33 144.8 118 59.3
Nitab4.5_0007223g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 5.0e-33 144.8 105 65.7
Nitab4.5_0008228g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 5.0e-33 144.8 105 65.7
Sopen10g029170 Solanum pennellii HOM05D002672 ORTHO05D002887 8.6e-33 144.1 105 64.8
PGSC0003DMG400008367 Solanum tuberosum HOM05D002672 ORTHO05D002887 8.6e-33 144.1 105 64.8
Solyc10g078520.2 Solanum lycopersicum HOM05D002672 ORTHO05D002887 1.5e-32 143.3 105 64.8
HanXRQChr03g0090411 Helianthus annuus HOM05D002672 ORTHO05D002887 1.9e-32 142.9 117 58.1
CAN.G960.51 Capsicum annuum HOM05D002672 ORTHO05D002887 2.5e-32 142.5 105 63.8
DCAR_009678 Daucus carota HOM05D002672 ORTHO05D002887 5.6e-32 141.4 116 59.5
CDE10G0048 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 2.8e-31 139.0 105 61.0
Migut.D01187 Erythranthe guttata HOM05D002672 ORTHO05D002887 4.7e-31 138.3 101 66.3
FAN10G0774 Fragaria x ananassa HOM05D002672 ORTHO05D002887 4.7e-31 138.3 105 65.7
ECA285G0009 Erigeron canadensis HOM05D002672 ORTHO05D002887 6.1e-31 137.9 117 57.3
Migut.C00472 Erythranthe guttata HOM05D002672 ORTHO05D002887 8.0e-31 137.5 101 65.3
Lsat_1_v5_gn_1_59540 Lactuca sativa HOM05D002672 ORTHO05D002887 1.0e-30 137.1 123 57.7
QL07p020088 Quercus lobata HOM05D002672 ORTHO05D002887 1.0e-30 137.1 130 56.2
PGR042G0488 Punica granatum HOM05D002672 ORTHO05D002887 3.0e-30 135.6 106 64.2
SEGI_38200 Sequoiadendron giganteum HOM05D002672 ORTHO05D002887 4.0e-30 135.2 106 62.3
ATR0697G210 Amborella trichopoda HOM05D002672 ORTHO05D002887 1.5e-29 133.3 115 60.9
DCAR_013691 Daucus carota HOM05D002672 ORTHO05D002887 8.3e-28 127.5 118 54.2
HPP92_009426 Vanilla planifolia HOM05D002672 ORTHO05D002887 8.3e-28 127.5 116 56.0
Zm00001eb057160 Zea mays HOM05D002672 ORTHO05D002887 1.5e-24 116.7 118 50.0
Os03g0748200 Oryza sativa ssp. japonica HOM05D002672 ORTHO05D002887 7.3e-24 114.4 118 50.8
Pp3c17_17740 Physcomitrium patens HOM05D002672 ORTHO05D002887 9.5e-24 114.0 127 52.0
SMO116G0117 Selaginella moellendorffii HOM05D002672 ORTHO05D002887 1.6e-23 113.2 114 52.6
CAN.G497.82 Capsicum annuum HOM05D002672 ORTHO05D002887 1.3e-20 103.6 94 56.4
SHI00535 Sapria himalayana HOM05D002672 ORTHO05D002887 4.6e-18 95.1 88 55.7
HPP92_009448 Vanilla planifolia HOM05D000971 ORTHO05D002887 1.2e-10 70.5 77 50.6
Actinidia22088 Actinidia chinensis HOM05D002672 ORTHO05D002887 1.5e-08 63.5 66 48.5
CBR_g34558 Chara braunii HOM05D002672 ORTHO05D002887 1.2e-07 60.5 135 34.8
AagrBONN_evm.TU.Sc2ySwM_362.1458 Anthoceros agrestis HOM05D002672 ORTHO05D002887 4.7e-07 58.5 58 50.0
Mapoly0099s0054 Marchantia polymorpha HOM05D002672 ORTHO05D002887 1.8e-06 56.6 54 55.6


User provided reference genes

Program Settings