Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 4.7e-187 657.9 378 100.0
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.9e-117 425.6 271 77.9
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 2.9e-112 409.5 263 74.1
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 1.9e-111 406.8 248 81.5
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 1.9e-111 406.8 260 74.6
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.2e-110 404.1 264 73.9
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 2.7e-110 402.9 263 74.5
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 4.6e-110 402.1 263 73.8
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 6.0e-110 401.7 263 74.5
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 1.0e-109 401.0 263 73.8
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 1.8e-109 400.2 263 73.0
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 2.3e-109 399.8 263 74.1
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 5.1e-109 398.7 271 71.2
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 6.7e-109 398.3 261 73.2
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 8.7e-109 397.9 269 72.1
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 8.7e-109 397.9 257 75.1
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 1.1e-108 397.5 252 74.6
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.9e-108 396.7 260 74.2
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 4.3e-108 395.6 260 73.8
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 7.4e-108 394.8 257 73.9
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 1.3e-107 394.0 240 80.4
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 2.1e-107 393.3 257 73.5
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 2.1e-107 393.3 252 74.6
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 2.8e-107 392.9 254 74.0
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 4.8e-107 392.1 261 72.0
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 4.8e-107 392.1 260 73.5
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 4.8e-107 392.1 260 73.5
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 6.2e-107 391.7 257 74.3
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 1.1e-106 391.0 260 71.5
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 1.1e-106 391.0 257 71.6
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 1.4e-106 390.6 264 71.6
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.8e-106 390.2 264 72.0
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 3.1e-106 389.4 261 71.3
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 3.1e-106 389.4 263 71.1
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 9.0e-106 387.9 264 71.2
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.2e-105 387.5 264 71.6
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 1.2e-105 387.5 252 74.2
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 3.4e-105 386.0 256 70.7
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 3.4e-105 386.0 286 66.4
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 1.0e-104 384.4 257 69.3
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.3e-104 384.0 255 71.8
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.7e-104 383.6 263 69.6
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 2.9e-104 382.9 260 70.0
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 2.9e-104 382.9 260 71.2
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 3.8e-104 382.5 257 71.2
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 3.8e-104 382.5 257 71.6
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 4.9e-104 382.1 260 70.8
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 6.5e-104 381.7 257 71.6
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 8.4e-104 381.3 273 68.5
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.1e-103 380.9 256 70.3
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 1.4e-103 380.6 257 71.6
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 5.5e-103 378.6 257 72.0
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 9.3e-103 377.9 253 70.4
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 4.6e-102 375.6 252 71.0
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 4.6e-102 375.6 263 70.0
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 6.0e-102 375.2 260 71.2
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 7.9e-102 374.8 252 71.0
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 1.8e-101 373.6 403 54.8
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 2.3e-101 373.2 257 69.6
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 3.9e-101 372.5 259 70.3
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 6.7e-101 371.7 267 68.2
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 6.7e-101 371.7 251 69.3
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 1.1e-100 370.9 249 71.1
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 1.5e-100 370.5 257 70.4
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 1.9e-100 370.2 264 66.7
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 4.3e-100 369.0 264 69.3
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 4.3e-100 369.0 257 68.5
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 7.4e-100 368.2 254 70.1
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 9.6e-100 367.9 257 68.9
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.3e-99 367.5 265 67.2
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 1.6e-99 367.1 259 69.1
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 2.1e-99 366.7 260 69.2
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 2.1e-99 366.7 254 69.7
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 3.7e-99 365.9 257 67.3
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 4.8e-99 365.5 259 68.3
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 8.2e-99 364.8 252 70.2
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 1.1e-98 364.4 272 65.1
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 1.4e-98 364.0 254 68.5
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 1.8e-98 363.6 260 68.1
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 2.4e-98 363.2 256 68.0
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 5.3e-98 362.1 252 69.0
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 5.3e-98 362.1 254 68.1
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 9.0e-98 361.3 240 74.2
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 1.5e-97 360.5 259 67.2
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 3.4e-97 359.4 256 68.8
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 4.5e-97 359.0 258 67.1
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 4.5e-97 359.0 280 63.9
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 5.9e-97 358.6 256 67.2
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 7.6e-97 358.2 272 64.3
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 1.7e-96 357.1 256 67.2
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 3.8e-96 355.9 254 67.7
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 2.5e-95 353.2 272 62.5
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 3.2e-95 352.8 256 66.0
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 1.6e-94 350.5 256 66.0
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 2.1e-94 350.1 252 67.1
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 2.7e-94 349.7 258 65.5
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 3.6e-94 349.4 252 67.5
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 7.9e-94 348.2 256 65.6
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 1.0e-93 347.8 318 56.0
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.0e-93 347.8 269 65.1
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 2.3e-93 346.7 260 65.8
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 5.1e-93 345.5 257 65.4
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 6.7e-93 345.1 258 65.1
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.1e-92 344.4 255 64.3
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 1.1e-92 344.4 269 63.2
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 1.9e-92 343.6 245 67.8
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 7.4e-92 341.7 252 65.1
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 9.1e-90 334.7 252 64.7
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 1.3e-88 330.9 299 56.2
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 1.4e-87 327.4 260 60.8
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 4.2e-87 325.9 260 62.3
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 2.6e-81 306.6 211 71.1
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 1.3e-80 304.3 211 69.7
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 4.4e-76 289.3 202 69.3
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 1.7e-75 287.3 184 76.6
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.4e-74 284.3 212 66.0
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 2.6e-73 280.0 183 76.0
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 3.5e-73 279.6 264 55.7
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 6.1e-70 268.9 273 52.0
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 5.2e-69 265.8 277 50.2
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 8.8e-69 265.0 259 49.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 8.2e-67 258.5 255 51.8
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 5.9e-65 252.3 192 65.6
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 7.2e-63 245.4 171 69.6
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 7.2e-63 245.4 171 69.6
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 9.4e-63 245.0 174 68.4
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.0e-61 241.5 256 52.0
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 8.8e-61 238.4 171 67.3
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.1e-58 229.6 171 64.9
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 7.0e-58 228.8 247 48.6
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 7.0e-58 228.8 176 63.6
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 1.7e-56 224.2 250 49.2
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 1.5e-52 211.1 174 63.2
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 6.3e-51 205.7 221 52.0
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 8.3e-51 205.3 253 45.8
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 4.3e-47 193.0 262 44.7
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 9.5e-47 191.8 130 71.5
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 6.1e-46 189.1 118 78.0
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 1.4e-45 188.0 114 79.8
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 4.4e-44 183.0 240 41.2
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 4.4e-44 183.0 208 46.2
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 4.6e-41 172.9 219 47.9
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 5.9e-41 172.6 190 50.5
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 2.8e-38 163.7 172 46.5
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 8.9e-37 158.7 221 38.9
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 2.4e-34 150.6 183 48.6
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 4.1e-34 149.8 223 39.9
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 9.5e-31 138.7 153 47.7
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 2.1e-30 137.5 77 75.3
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.4e-26 124.8 78 70.5
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 1.2e-25 121.7 122 48.4
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 1.2e-25 121.7 122 48.4
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 5.1e-16 89.7 50 76.0
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 5.1e-16 89.7 50 76.0
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 1.8e-13 81.3 54 70.4
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 3.6e-06 57.0 145 27.6


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