Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 8.0e-37 157.5 153 100.0
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 6.6e-23 111.3 64 85.9
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 8.6e-23 110.9 64 85.9
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 7.3e-22 107.8 64 82.8
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 1.2e-21 107.1 73 74.0
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 1.6e-21 106.7 72 75.0
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 6.2e-21 104.8 67 74.6
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 6.2e-21 104.8 153 79.7
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 8.1e-21 104.4 72 72.2
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 1.8e-20 103.2 73 74.0
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 3.1e-20 102.4 144 78.5
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 4.0e-20 102.1 73 72.6
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 4.0e-20 102.1 73 71.2
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 4.0e-20 102.1 153 80.4
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 5.2e-20 101.7 153 78.4
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 8.9e-20 100.9 153 78.4
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 8.9e-20 100.9 153 78.4
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 1.2e-19 100.5 72 73.6
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.2e-19 100.5 154 81.8
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 1.5e-19 100.1 153 79.1
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 2.0e-19 99.8 67 74.6
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 2.0e-19 99.8 67 74.6
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 3.4e-19 99.0 71 73.2
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 5.8e-19 98.2 67 74.6
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 7.5e-19 97.8 81 60.5
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 7.5e-19 97.8 68 73.5
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 2.2e-18 96.3 68 69.1
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 2.2e-18 96.3 71 70.4
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 2.2e-18 96.3 73 72.6
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 2.9e-18 95.9 73 65.8
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 3.7e-18 95.5 72 66.7
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 4.9e-18 95.1 70 65.7
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 4.9e-18 95.1 153 71.2
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 6.4e-18 94.7 156 75.0
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 8.3e-18 94.4 73 67.1
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 1.1e-17 94.0 153 70.6
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.1e-17 94.0 153 70.6
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 1.4e-17 93.6 71 66.2
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.9e-17 93.2 153 69.9
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 1.9e-17 93.2 154 78.6
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.9e-17 93.2 73 65.8
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 1.9e-17 93.2 153 81.0
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 2.4e-17 92.8 60 71.7
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 2.4e-17 92.8 55 81.8
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 7.1e-17 91.3 67 68.7
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 7.1e-17 91.3 67 68.7
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 9.2e-17 90.9 67 65.7
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 1.2e-16 90.5 74 67.6
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 1.2e-16 90.5 67 64.2
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 1.2e-16 90.5 74 60.8
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 2.1e-16 89.7 153 76.5
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 2.1e-16 89.7 66 72.7
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 2.7e-16 89.4 75 62.7
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 4.6e-16 88.6 145 72.4
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 6.0e-16 88.2 65 70.8
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 7.8e-16 87.8 60 75.0
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 7.8e-16 87.8 71 59.2
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.0e-15 87.4 53 77.4
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 1.0e-15 87.4 72 56.9
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 1.0e-15 87.4 61 67.2
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 2.3e-15 86.3 74 63.5
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 3.0e-15 85.9 62 72.6
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 3.9e-15 85.5 60 73.3
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 5.1e-15 85.1 60 71.7
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 5.1e-15 85.1 153 77.8
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 6.6e-15 84.7 62 64.5
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 6.6e-15 84.7 71 60.6
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 8.6e-15 84.3 61 67.2
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 8.6e-15 84.3 62 72.6
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 1.1e-14 84.0 59 72.9
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.1e-14 84.0 72 56.9
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 1.1e-14 84.0 70 57.1
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.1e-14 84.0 68 63.2
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 1.9e-14 83.2 62 67.7
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 1.9e-14 83.2 62 67.7
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 1.9e-14 83.2 62 67.7
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 1.9e-14 83.2 62 67.7
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 1.9e-14 83.2 60 70.0
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.9e-14 83.2 65 66.2
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 1.9e-14 83.2 64 70.3
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 4.3e-14 82.0 60 70.0
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 4.3e-14 82.0 73 58.9
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 5.6e-14 81.6 54 72.2
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 1.6e-13 80.1 58 63.8
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 4.7e-13 78.6 71 59.2
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.4e-12 77.0 72 59.7
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 3.1e-12 75.9 55 69.1
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 4.0e-12 75.5 59 64.4
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 5.2e-12 75.1 65 61.5
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 5.2e-12 75.1 88 44.3
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 8.9e-12 74.3 68 58.8
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 1.5e-11 73.6 49 75.5
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 1.3e-10 70.5 55 69.1
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 3.8e-10 68.9 52 67.3
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 1.9e-09 66.6 50 66.0
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 5.4e-09 65.1 57 54.4
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 7.1e-09 64.7 41 70.7
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 1.0e-07 60.8 40 72.5
ClCG02G022890 Citrullus lanatus HOM05D007144 ORTHO05D008709 1.3e-07 60.5 161 60.9
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 1.7e-07 60.1 50 58.0
Cre12.g484500 Chlamydomonas reinhardtii HOM05D007144 ORTHO05D008709 2.3e-07 59.7 62 48.4
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 2.3e-07 59.7 55 52.7
SMO164G0043 Selaginella moellendorffii HOM05D007144 ORTHO05D008709 1.1e-06 57.4 63 49.2
Nn1g00319 Nelumbo nucifera HOM05D001964 ORTHO05D001879 4.3e-06 55.5 55 47.3


User provided reference genes

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