Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 3.0e-295 1017.7 486 100.0
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 8.5e-258 893.3 487 88.3
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.5e-257 891.7 487 88.1
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.1e-254 882.9 489 85.7
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.0e-251 872.1 496 83.1
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.2e-250 868.6 496 82.7
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 3.6e-248 861.3 488 83.4
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 3.6e-248 861.3 486 83.7
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 5.2e-247 857.4 487 83.6
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 2.8e-245 851.7 486 82.9
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.4e-244 849.4 486 82.5
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 1.4e-244 849.4 486 82.7
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.8e-244 849.0 488 82.8
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 9.1e-244 846.7 488 82.2
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.2e-243 846.3 486 82.3
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.6e-243 845.9 488 81.8
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 1.6e-243 845.9 486 83.1
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.6e-243 845.9 486 82.5
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.7e-243 845.1 486 82.3
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 4.5e-243 844.3 486 82.1
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.0e-242 843.2 486 82.1
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.0e-242 843.2 581 72.6
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.7e-242 842.4 486 81.9
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 2.9e-242 841.6 486 81.1
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 3.8e-242 841.3 486 81.1
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 3.8e-242 841.3 486 82.5
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 6.5e-242 840.5 486 81.7
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 1.1e-241 839.7 486 81.7
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 4.2e-241 837.8 487 81.9
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 7.2e-241 837.0 492 79.9
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 9.4e-241 836.6 486 81.7
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 1.2e-240 836.3 486 81.5
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 2.1e-240 835.5 487 81.3
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 2.7e-240 835.1 486 80.9
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 2.7e-240 835.1 488 80.9
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 3.6e-240 834.7 486 80.0
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.0e-239 833.2 487 81.7
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.5e-238 829.3 501 79.8
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 1.5e-238 829.3 511 78.5
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.0e-238 828.9 486 80.9
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 2.0e-238 828.9 487 81.5
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 3.4e-238 828.2 486 81.3
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 7.5e-238 827.0 488 80.3
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.8e-237 825.1 486 79.6
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 4.8e-237 824.3 492 79.3
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 4.8e-237 824.3 492 79.5
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 6.3e-237 823.9 487 81.3
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 5.4e-236 820.8 489 80.2
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.6e-235 819.3 486 79.2
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 2.0e-235 818.9 486 79.8
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 2.7e-235 818.5 486 79.2
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 3.5e-235 818.1 486 79.0
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 4.5e-235 817.8 486 79.6
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.0e-234 814.3 472 81.4
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 6.5e-234 813.9 486 79.6
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 3.2e-233 811.6 486 78.8
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-231 806.2 475 81.3
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.8e-231 805.8 522 73.9
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 1.8e-231 805.8 573 69.3
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.5e-230 802.7 464 81.9
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 1.5e-230 802.7 492 78.3
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 2.0e-230 802.4 486 78.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 5.4e-228 794.3 492 76.6
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 4.5e-227 791.2 486 78.4
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 5.9e-227 790.8 486 76.7
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 7.7e-227 790.4 486 77.6
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 1.0e-226 790.0 486 77.2
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 1.3e-226 789.6 491 77.4
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 1.7e-226 789.3 474 78.3
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 1.7e-226 789.3 486 76.7
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 3.8e-226 788.1 570 69.5
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 4.3e-225 784.6 488 75.6
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 7.3e-225 783.9 486 77.8
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 2.1e-224 782.3 486 75.7
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 1.2e-222 776.5 486 75.5
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 4.4e-222 774.6 487 74.9
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 7.5e-222 773.9 486 74.5
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 2.2e-221 772.3 486 75.5
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 3.7e-221 771.5 486 75.5
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 6.4e-221 770.8 488 75.0
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 1.1e-220 770.0 486 75.5
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.1e-220 770.0 486 75.7
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.1e-220 770.0 486 75.1
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 1.8e-220 769.2 492 74.4
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 3.2e-220 768.5 489 75.5
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 5.4e-220 767.7 488 74.0
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.6e-219 766.1 486 74.5
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 3.5e-219 765.0 486 74.5
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 4.6e-219 764.6 486 74.7
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 5.9e-219 764.2 486 74.5
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 1.3e-218 763.1 486 74.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 2.3e-218 762.3 486 74.1
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 3.9e-218 761.5 486 74.1
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 3.9e-218 761.5 486 74.1
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 4.3e-217 758.1 486 76.5
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 4.0e-215 751.5 510 71.0
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 9.2e-212 740.3 412 84.0
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.0e-210 736.9 575 64.9
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 8.1e-208 727.2 600 62.2
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 1.2e-206 723.4 418 81.8
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.0e-206 722.6 546 65.8
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 3.7e-205 718.4 486 70.0
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 4.9e-205 718.0 495 70.3
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 2.7e-203 712.2 510 68.6
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.1e-200 702.6 454 75.1
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.3e-189 666.8 374 84.0
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 7.1e-188 661.0 412 75.5
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 3.5e-187 658.7 361 84.5
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 4.8e-184 648.3 435 70.6
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 3.4e-182 642.1 490 63.3
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 2.7e-179 632.5 498 59.4
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 1.3e-178 630.2 491 61.9
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 6.9e-175 617.8 374 76.5
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.8e-173 612.1 374 75.9
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 6.7e-170 601.3 328 86.6
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 8.7e-170 600.9 343 81.9
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 8.7e-170 600.9 328 86.3
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.6e-168 596.7 328 85.4
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.0e-162 577.4 482 58.1
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 2.5e-153 546.2 328 79.3
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 7.4e-153 544.7 334 78.7
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 2.8e-152 542.7 325 79.7
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 2.4e-151 539.7 361 72.3
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.0e-146 522.7 301 81.1
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.3e-144 517.3 352 71.3
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 7.4e-137 491.5 328 73.8
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.2e-110 404.4 222 82.9
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 5.4e-103 379.0 439 45.8
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 4.6e-102 375.9 450 43.8
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.6e-97 360.1 211 80.6
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 1.3e-93 347.8 233 70.4
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 8.9e-90 335.1 437 43.2
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 4.0e-82 309.7 187 78.6
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-80 304.3 159 86.8
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-80 304.3 159 86.8
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.8e-78 295.4 159 85.5
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 3.1e-66 256.9 138 82.6
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 7.6e-57 225.7 430 33.7
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 4.5e-49 199.9 106 87.7
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.1e-47 192.6 106 84.0
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.7e-45 186.0 94 90.4
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.9e-44 184.5 93 91.4
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 1.7e-40 171.4 144 54.2
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 5.0e-40 169.9 119 71.4
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 3.9e-37 160.2 91 82.4
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 2.6e-25 120.9 67 83.6
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 1.7e-24 118.2 87 66.7
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.7e-22 110.9 70 80.0
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.0e-22 109.4 77 68.8
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.9e-21 107.1 65 72.3
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 2.6e-17 94.4 69 66.7
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 1.4e-10 72.0 123 38.2
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 8.5e-08 62.8 130 35.4


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