Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G143100 Carya illinoinensis HOM05D005360 ORTHO05D006501 1.5e-68 262.7 127 100.0
CiPaw.13G142900 Carya illinoinensis HOM05D005360 ORTHO05D006501 9.9e-57 223.4 127 87.4
CiPaw.14G105400 Carya illinoinensis HOM05D005360 ORTHO05D006501 3.9e-45 184.9 115 76.5
Haze_23502 Corylus avellana HOM05D005360 ORTHO05D006501 1.3e-40 169.9 123 72.4
QL01p014311 Quercus lobata HOM05D005360 ORTHO05D006501 5.4e-39 164.5 115 72.2
COL.COLO4_19249 Corchorus olitorius HOM05D000737 ORTHO05D000581 1.6e-35 152.9 115 65.2
GSVIVG01031434001 Vitis vinifera HOM05D005360 ORTHO05D006501 1.6e-35 152.9 115 65.2
Thecc.09G295200 Theobroma cacao HOM05D005360 ORTHO05D006501 3.7e-35 151.8 115 65.2
TWI31G0773 Tripterygium wilfordii HOM05D005360 ORTHO05D006501 8.1e-35 150.6 116 63.8
Ciclev10029076m.g Citrus clementina HOM05D005360 ORTHO05D006501 1.1e-34 150.2 115 59.1
CSS0014580 Camellia sinensis var. sinensis HOM05D005360 ORTHO05D006501 1.4e-34 149.8 116 65.5
Manes.11G154700 Manihot esculenta HOM05D005360 ORTHO05D006501 6.9e-34 147.5 115 60.9
RcHm_v2.0_Chr5g0056101 Rosa chinensis HOM05D005360 ORTHO05D006501 1.2e-33 146.7 118 61.9
Sed0004275 Sechium edule HOM05D005360 ORTHO05D006501 1.2e-33 146.7 118 64.4
Rhsim13G0102900 Rhododendron simsii HOM05D005360 ORTHO05D006501 2.6e-33 145.6 116 62.1
Gohir.A07G106300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 7.6e-33 144.1 115 60.9
Gorai.001G118400 Gossypium raimondii HOM05D005360 ORTHO05D006501 9.9e-33 143.7 115 60.0
Duzib168G1167 Durio zibethinus HOM05D005360 ORTHO05D006501 1.7e-32 142.9 115 60.0
vmacro03239 Vaccinium macrocarpon HOM05D005360 ORTHO05D006501 1.7e-32 142.9 116 62.9
Actinidia24162 Actinidia chinensis HOM05D005360 ORTHO05D006501 2.2e-32 142.5 116 62.1
CsaV3_6G014530 Cucumis sativus L. HOM05D005360 ORTHO05D006501 2.9e-32 142.1 118 61.0
Gohir.D07G110200 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.9e-32 142.1 115 59.1
MD03G1130500 Malus domestica HOM05D005360 ORTHO05D006501 2.9e-32 142.1 118 59.3
Atru.chr3.3432 Acer truncatum HOM05D005360 ORTHO05D006501 4.9e-32 141.4 115 56.5
Dinv29396 Davidia involucrata HOM05D005360 ORTHO05D006501 4.9e-32 141.4 116 60.3
Sabra09G0000500 Salix brachista HOM05D005360 ORTHO05D006501 8.4e-32 140.6 115 60.0
Medtr2g084545 Medicago truncatula HOM05D005360 ORTHO05D006501 1.1e-31 140.2 116 60.3
TAR633G1180 Trochodendron aralioides HOM05D005360 ORTHO05D006501 1.1e-31 140.2 116 59.5
MELO3C021472.2 Cucumis melo HOM05D005360 ORTHO05D006501 1.4e-31 139.8 118 61.0
Hma1.2p1_0051F.1_g029700 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 1.4e-31 139.8 116 61.2
Ca_01695_v3 Cicer arietinum L. HOM05D005360 ORTHO05D006501 4.2e-31 138.3 117 59.0
Lj1A216T24 Lonicera japonica HOM05D005360 ORTHO05D006501 4.2e-31 138.3 116 59.5
Prupe.6G115300 Prunus persica HOM05D005360 ORTHO05D006501 4.2e-31 138.3 115 60.0
Potri.009G002000 Populus trichocarpa HOM05D005360 ORTHO05D006501 7.1e-31 137.5 115 59.1
Gohir.1Z049633 Gossypium hirsutum HOM05D005360 ORTHO05D006501 9.3e-31 137.1 115 59.1
AUR62031793 Chenopodium quinoa HOM05D005360 ORTHO05D006501 1.2e-30 136.7 114 58.8
FvH4_3g30230 Fragaria vesca HOM05D005360 ORTHO05D006501 1.6e-30 136.3 118 57.6
FAN11G3336 Fragaria x ananassa HOM05D005360 ORTHO05D006501 1.6e-30 136.3 118 57.6
TPR.G32397 Trifolium pratense HOM05D005360 ORTHO05D006501 1.6e-30 136.3 116 57.8
Gohir.A07G000166 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.1e-30 136.0 115 58.3
MD11G1152100 Malus domestica HOM05D005360 ORTHO05D006501 2.7e-30 135.6 116 57.8
Phvul.006G166300 Phaseolus vulgaris HOM05D005360 ORTHO05D006501 2.7e-30 135.6 116 59.5
Glyma.13G219600 Glycine max HOM05D005360 ORTHO05D006501 3.5e-30 135.2 116 57.8
CAN.G546.64 Capsicum annuum HOM05D005360 ORTHO05D006501 4.6e-30 134.8 116 59.5
Sopen11g026340 Solanum pennellii HOM05D005360 ORTHO05D006501 4.6e-30 134.8 116 59.5
EL10Ac9g21036 Beta vulgaris HOM05D005360 ORTHO05D006501 6.0e-30 134.4 115 60.0
FAN21G0874 Fragaria x ananassa HOM05D005360 ORTHO05D006501 7.9e-30 134.0 118 56.8
Nn6g35157 Nelumbo nucifera HOM05D005360 ORTHO05D006501 1.0e-29 133.7 116 61.2
TAR633G1639 Trochodendron aralioides HOM05D005360 ORTHO05D006501 1.0e-29 133.7 116 56.9
PGSC0003DMG400000427 Solanum tuberosum HOM05D005360 ORTHO05D006501 1.3e-29 133.3 116 57.8
SGA_v2.0_scaffold193G40720 Striga asiatica HOM05D005360 ORTHO05D006501 1.3e-29 133.3 116 57.8
Hund07728 Selenicereus undatus HOM05D005360 ORTHO05D006501 1.8e-29 132.9 114 57.9
Lj3g0014716 Lotus japonicus HOM05D005360 ORTHO05D006501 2.3e-29 132.5 116 56.0
arahy.Tifrunner.gnm1.ann1.E5WW1G Arachis hypogaea HOM05D005360 ORTHO05D004899 3.9e-29 131.7 115 53.9
DCAR_015495 Daucus carota HOM05D005360 ORTHO05D006501 3.9e-29 131.7 116 56.9
Solyc11g066610.2 Solanum lycopersicum HOM05D005360 ORTHO05D006501 3.9e-29 131.7 116 57.8
arahy.Tifrunner.gnm1.ann1.9X9VA5 Arachis hypogaea HOM05D005360 ORTHO05D006501 5.1e-29 131.3 115 53.9
HanXRQChr13g0403531 Helianthus annuus HOM05D005360 ORTHO05D006501 6.7e-29 131.0 115 57.4
Psat5g252440 Pisum sativum HOM05D005360 ORTHO05D006501 8.7e-29 130.6 116 55.2
Ah.01g016120 Amaranthus hybridus HOM05D005360 ORTHO05D006501 1.5e-28 129.8 114 56.1
Nitab4.5_0000442g0050 Nicotiana tabacum HOM05D005360 ORTHO05D006501 1.9e-28 129.4 116 56.9
PGR102G1574 Punica granatum HOM05D005360 ORTHO05D006501 2.5e-28 129.0 116 52.6
Migut.D02306 Erythranthe guttata HOM05D005360 ORTHO05D006501 3.3e-28 128.6 116 56.0
CANSAT64G2995 Cannabis sativa HOM05D005360 ORTHO05D006501 5.6e-28 127.9 119 57.1
Lalb_Chr24g0395031 Lupinus albus HOM05D005360 ORTHO05D006501 7.4e-28 127.5 116 54.3
CARHR008050 Cardamine hirsuta HOM05D005360 ORTHO05D006501 9.6e-28 127.1 114 53.5
CANSAT64G2904 Cannabis sativa HOM05D005360 ORTHO05D006501 1.3e-27 126.7 119 56.3
Eucgr.B03910 Eucalyptus grandis HOM05D005360 ORTHO05D006501 1.6e-27 126.3 116 55.2
MBI01_g19099_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 2.1e-27 125.9 116 52.6
ATR0665G582 Amborella trichopoda HOM05D005360 ORTHO05D006501 3.7e-27 125.2 116 53.4
Lsat_1_v5_gn_6_42160 Lactuca sativa HOM05D005360 ORTHO05D006501 6.2e-27 124.4 116 54.3
Sc21g0004290 Simmondsia chinensis HOM05D005360 ORTHO05D006501 1.1e-26 123.6 114 57.9
Aqoxy1G01027 Aquilegia oxysepala HOM05D005360 ORTHO05D006501 2.4e-26 122.5 114 52.6
Cc04_g14880 Coffea canephora HOM05D005360 ORTHO05D006501 2.4e-26 122.5 116 55.2
MSTRG.21078 Avicennia marina HOM05D005360 ORTHO05D006501 3.1e-26 122.1 116 54.3
C08p03560 Brassica napus HOM05D005360 ORTHO05D006501 4.0e-26 121.7 115 50.4
Sp1g06870 Schrenkiella parvula HOM05D005360 ORTHO05D006501 4.0e-26 121.7 115 50.4
THA.LOC104800565 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 5.3e-26 121.3 115 48.7
THA.LOC104826399 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 6.9e-26 120.9 117 51.3
C08p50100 Brassica napus HOM05D005360 ORTHO05D006501 3.4e-25 118.6 115 49.6
BolC8t52540H Brassica oleracea HOM05D005360 ORTHO05D006501 3.4e-25 118.6 115 49.6
BolC8t47160H Brassica oleracea HOM05D005360 ORTHO05D006501 5.8e-25 117.9 115 50.4
Carub.0001s0758 Capsella rubella HOM05D005360 ORTHO05D006501 5.8e-25 117.9 115 47.8
Thhalv10008429m.g Eutrema salsugineum HOM05D005360 ORTHO05D006501 5.8e-25 117.9 115 49.6
BraA08t35436Z Brassica rapa HOM05D005360 ORTHO05D006501 7.6e-25 117.5 114 50.0
A08p35270 Brassica napus HOM05D005360 ORTHO05D006501 1.0e-24 117.1 115 49.6
Aa31LG1G18020 Aethionema arabicum HOM05D005360 ORTHO05D006501 3.8e-24 115.2 115 47.8
AL1G18630 Arabidopsis lyrata HOM05D005360 ORTHO05D006501 4.9e-24 114.8 114 49.1
SHI06160 Sapria himalayana HOM05D005360 ORTHO05D006501 4.9e-24 114.8 115 47.8
Gohir.A02G097303 Gossypium hirsutum HOM05D005360 ORTHO05D006501 6.5e-24 114.4 133 48.9
AT1G08220 Arabidopsis thaliana HOM05D005360 ORTHO05D006501 8.4e-24 114.0 114 47.4
Peaxi162Scf00150g00315 Petunia axillaris HOM05D005360 ORTHO05D006501 2.5e-23 112.5 134 47.8
BcaC07g42518 Brassica carinata HOM05D005360 ORTHO05D006501 7.1e-23 110.9 115 49.6
CDE09G0858 Ceratophyllum demersum HOM05D005360 ORTHO05D006501 1.3e-21 106.7 118 44.9
MBI01_g31369_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 1.3e-21 106.7 116 47.4
PSO339G5504 Papaver somniferum HOM05D005360 ORTHO05D006501 3.9e-21 105.1 114 46.5
PSO063G2369 Papaver somniferum HOM05D005360 ORTHO05D006501 1.9e-20 102.8 114 45.6
Gohir.A05G054800 Gossypium hirsutum HOM05D005360 ORTHO05D006501 9.0e-18 94.0 115 45.2
VMungo0540G0253 Vigna mungo HOM05D005360 ORTHO05D006501 1.5e-17 93.2 90 48.9
unitig_899.g14961 Utricularia gibba HOM05D005360 ORTHO05D006501 2.0e-17 92.8 142 42.3
HPP92_015033 Vanilla planifolia HOM05D005360 ORTHO05D006501 2.0e-17 92.8 101 43.6
HPP92_015112 Vanilla planifolia HOM05D005360 ORTHO05D006501 2.0e-17 92.8 101 43.6
Os05g0176500 Oryza sativa ssp. japonica HOM05D005360 ORTHO05D006501 1.3e-16 90.1 116 39.7
Gohir.A06G038884 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.7e-16 89.7 126 42.1
SalBow6G0303 Salvia bowleyana HOM05D005360 ORTHO05D006501 1.7e-16 89.7 132 39.4
BcaB03g13345 Brassica carinata HOM05D005360 ORTHO05D006501 3.8e-16 88.6 135 37.8
Zm00001eb345720 Zea mays HOM05D005360 ORTHO05D006501 5.5e-15 84.7 102 43.1
Hma1.2p1_0051F.1_g029710 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 9.4e-15 84.0 65 64.6
Gohir.A10G063101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.1e-14 82.8 79 53.2
Gohir.A06G034300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 7.9e-14 80.9 72 51.4
Gohir.1Z049508 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.0e-13 79.0 65 55.4
Oeu026987.1 Olea europaea HOM05D005360 ORTHO05D006501 3.0e-13 79.0 63 61.9
Eucgr.L03607 Eucalyptus grandis HOM05D005360 ORTHO05D006501 3.9e-13 78.6 74 52.7
Gohir.A06G133300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 5.1e-13 78.2 86 47.7
Gohir.A06G100002 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.1e-12 77.0 50 68.0
SEGI_40723 Sequoiadendron giganteum HOM05D005360 ORTHO05D006501 2.5e-12 75.9 79 49.4
Gohir.A09G043650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 7.7e-09 64.3 57 54.4
AUR62023988 Chenopodium quinoa HOM05D005360 ORTHO05D006501 8.5e-08 60.8 53 52.8
Cpa.g.sc2403.1 Carica papaya HOM05D005360 ORTHO05D006501 1.1e-07 60.5 52 48.1
Gohir.A05G334300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 9.4e-07 57.4 58 50.0
Gohir.A11G191650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.2e-06 57.0 71 43.7
SMO116G0134 Selaginella moellendorffii HOM05D005360 ORTHO05D006501 1.6e-06 56.6 62 38.7
Actinidia07196 Actinidia chinensis HOM05D005360 ORTHO05D006501 2.7e-06 55.8 41 58.5
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.1e-06 54.7 48 52.1


User provided reference genes

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