Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 5.8e-58 227.3 107 100.0
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.5e-45 185.3 107 79.4
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 2.1e-44 182.2 106 80.2
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 4.7e-44 181.0 105 80.0
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 2.4e-43 178.7 107 75.7
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 4.0e-43 177.9 107 80.4
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 6.8e-43 177.2 94 85.1
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 2.6e-42 175.3 99 78.8
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 2.6e-42 175.3 107 78.5
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.4e-42 174.9 107 76.6
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 7.6e-42 173.7 104 76.0
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 7.6e-42 173.7 108 74.1
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.7e-41 172.6 107 74.8
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.7e-41 172.6 107 76.6
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 2.9e-41 171.8 107 74.8
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 4.9e-41 171.0 94 80.9
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 8.4e-41 170.2 105 75.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 1.1e-40 169.9 107 73.8
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.1e-40 169.9 107 72.9
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 9.2e-40 166.8 94 78.7
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 4.6e-39 164.5 107 72.0
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 6.0e-39 164.1 102 72.5
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 7.8e-39 163.7 111 68.5
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 1.0e-38 163.3 107 69.2
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 3.9e-38 161.4 107 68.2
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 5.1e-38 161.0 105 71.4
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 5.1e-38 161.0 104 71.2
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.1e-38 161.0 107 69.2
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 6.6e-38 160.6 96 71.9
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.5e-37 159.5 107 69.2
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.5e-37 159.5 105 69.5
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.9e-37 159.1 97 73.2
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 5.6e-37 157.5 107 68.2
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 7.3e-37 157.1 107 68.2
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 7.3e-37 157.1 108 67.6
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 9.6e-37 156.8 105 69.5
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.2e-36 156.4 107 70.1
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.6e-36 156.0 107 67.3
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.6e-36 156.0 106 66.0
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.6e-36 156.0 105 69.5
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 2.1e-36 155.6 107 67.3
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 2.8e-36 155.2 107 68.2
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 2.8e-36 155.2 105 68.6
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 3.6e-36 154.8 127 59.8
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 4.7e-36 154.5 107 69.2
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 6.2e-36 154.1 107 67.3
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 8.1e-36 153.7 102 67.6
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.1e-35 153.3 105 67.6
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 1.4e-35 152.9 109 66.1
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.1e-35 151.8 106 67.0
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 3.1e-35 151.8 106 67.0
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 3.1e-35 151.8 173 48.0
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 4.0e-35 151.4 107 67.3
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.0e-35 151.4 104 64.4
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.0e-35 151.4 105 68.6
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 6.9e-35 150.6 106 67.0
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 9.0e-35 150.2 98 69.4
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.0e-34 149.1 106 66.0
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 3.4e-34 148.3 101 66.3
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.4e-34 147.9 106 66.0
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.8e-34 147.5 106 65.1
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.3e-33 146.4 110 62.7
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.9e-33 144.4 114 63.2
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.1e-32 143.3 104 65.4
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.9e-32 142.5 107 63.6
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 4.2e-32 141.4 108 62.0
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 5.4e-32 141.0 108 61.1
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 5.4e-32 141.0 81 75.3
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.3e-32 140.2 106 63.2
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.2e-31 139.8 110 62.7
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.6e-31 139.4 102 61.8
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.6e-31 139.4 102 61.8
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.0e-30 136.7 92 66.3
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.0e-30 136.7 81 74.1
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.3e-30 136.3 106 59.4
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.7e-30 136.0 79 74.7
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.7e-30 136.0 94 63.8
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.3e-30 135.6 104 60.6
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 3.0e-30 135.2 106 60.4
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 3.0e-30 135.2 106 60.4
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 6.6e-30 134.0 105 59.0
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 8.7e-30 133.7 106 59.4
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 4.3e-29 131.3 90 61.1
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 4.3e-29 131.3 108 56.5
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 7.3e-29 130.6 75 74.7
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 9.6e-29 130.2 141 46.1
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.3e-28 129.8 106 59.4
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.3e-28 129.8 92 59.8
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.6e-28 129.4 75 74.7
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 2.8e-28 128.6 106 54.7
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 2.8e-28 128.6 77 74.0
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.6e-28 128.3 106 57.5
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 4.8e-28 127.9 106 55.7
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 8.1e-28 127.1 109 54.1
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 1.8e-27 125.9 89 57.3
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.1e-27 125.2 125 51.2
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 6.9e-27 124.0 78 71.8
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 1.5e-26 122.9 78 69.2
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 2.6e-26 122.1 122 50.0
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 3.4e-26 121.7 78 69.2
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 4.5e-26 121.3 78 69.2
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 9.9e-26 120.2 123 50.4
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 9.9e-26 120.2 123 50.4
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.3e-25 119.8 128 48.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.3e-25 119.8 74 73.0
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 1.7e-25 119.4 69 75.4
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 2.2e-25 119.0 78 70.5
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.2e-25 119.0 123 49.6
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.1e-24 116.7 123 46.3
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.9e-24 115.9 78 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 1.6e-23 112.8 103 49.5
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.6e-23 112.8 70 71.4
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 2.1e-23 112.5 75 65.3
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.3e-22 109.8 71 70.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 5.1e-22 107.8 69 65.2
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 2.5e-21 105.5 73 67.1
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.3e-20 103.2 74 66.2
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.8e-19 99.4 73 57.5
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 6.9e-19 97.4 77 57.1
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 9.9e-18 93.6 67 64.2
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 9.9e-18 93.6 98 41.8
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 4.9e-17 91.3 52 78.8
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.2e-15 86.7 123 41.5
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 8.2e-12 73.9 50 68.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 4.0e-11 71.6 40 77.5
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 2.6e-10 68.9 40 77.5
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.9e-09 65.5 89 33.7
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 1.6e-07 59.7 52 57.7


User provided reference genes

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