Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 3.0e-45 184.9 99 100.0
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.2e-28 129.8 101 76.2
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 1.0e-24 116.7 106 68.9
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.5e-23 112.1 84 72.6
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 1.7e-19 99.4 89 69.7
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 3.0e-16 88.6 99 56.6
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 5.0e-16 87.8 101 56.4
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 1.9e-15 85.9 103 56.3
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 5.6e-15 84.3 95 54.7
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 8.1e-14 80.5 100 52.0
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.4e-13 79.7 99 51.5
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 1.4e-13 79.7 107 51.4
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 2.3e-13 79.0 104 50.0
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 3.1e-13 78.6 99 50.5
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 4.0e-13 78.2 102 55.9
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 5.2e-13 77.8 104 53.8
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 8.9e-13 77.0 104 51.9
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 8.9e-13 77.0 101 52.5
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.5e-12 76.3 104 52.9
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 2.6e-12 75.5 107 54.2
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.6e-12 75.5 99 52.5
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 4.4e-12 74.7 105 53.3
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 5.8e-12 74.3 110 48.2
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 9.9e-12 73.6 104 52.9
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 1.3e-11 73.2 99 46.5
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 2.2e-11 72.4 106 50.9
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 6.4e-11 70.9 101 52.5
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 6.4e-11 70.9 110 49.1
QL08p023218 Quercus lobata HOM05D008128 ORTHO05D010259 7.1e-10 67.4 96 56.2
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 9.2e-10 67.0 107 45.8
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 1.2e-09 66.6 107 45.8
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 1.2e-09 66.6 103 43.7
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 1.6e-09 66.2 107 46.7
FAN21G1942 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.1e-09 65.9 96 46.9
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 2.7e-09 65.5 104 48.1
FAN11G2911 Fragaria x ananassa HOM05D008128 ORTHO05D010259 3.5e-09 65.1 97 46.4
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 3.5e-09 65.1 99 48.5
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 4.6e-09 64.7 40 77.5
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 4.6e-09 64.7 47 72.3
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 6.0e-09 64.3 48 72.9
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 1.0e-08 63.5 107 44.9
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 1.0e-08 63.5 104 47.1
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 1.3e-08 63.2 99 48.5
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 1.7e-08 62.8 106 49.1
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 1.7e-08 62.8 103 40.8
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 2.3e-08 62.4 102 49.0
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 2.3e-08 62.4 91 52.7
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 3.0e-08 62.0 101 47.5
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 5.1e-08 61.2 102 46.1
Sed0019677 Sechium edule HOM05D008128 ORTHO05D010259 6.6e-08 60.8 124 41.1
CDE06G1241 Ceratophyllum demersum HOM05D008128 ORTHO05D010259 8.6e-08 60.5 104 48.1
CDE08G1127 Ceratophyllum demersum HOM05D003185 ORTHO05D007711 8.6e-08 60.5 105 46.7
TAR633G0657 Trochodendron aralioides HOM05D008128 ORTHO05D010259 8.6e-08 60.5 92 53.3
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 1.1e-07 60.1 103 42.7
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.5e-07 59.7 101 45.5
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 1.9e-07 59.3 108 46.3
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 3.3e-07 58.5 106 42.5
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 3.3e-07 58.5 104 40.4
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 7.3e-07 57.4 100 45.0
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 1.6e-06 56.2 98 42.9
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 2.1e-06 55.8 98 42.9
QL07p007910 Quercus lobata HOM05D008128 ORTHO05D010259 2.1e-06 55.8 39 69.2
Atru.chr3.3366 Acer truncatum HOM05D008128 ORTHO05D010259 3.6e-06 55.1 89 43.8
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 8.1e-06 53.9 71 45.1


User provided reference genes

Program Settings