Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G131500 Carya illinoinensis HOM05D001423 ORTHO05D033902 5.4e-50 200.7 100 100.0
Cfa009968 Carpinus fangiana HOM05D001423 ORTHO05D001412 1.6e-14 82.8 69 66.7
QL01p011359 Quercus lobata HOM05D001423 ORTHO05D001412 9.0e-13 77.0 68 67.6
QL01p011622 Quercus lobata HOM05D001423 ORTHO05D001412 9.0e-13 77.0 68 67.6
Manes.11G165300 Manihot esculenta HOM05D001423 ORTHO05D001412 7.6e-12 73.9 67 56.7
Manes.04G000400 Manihot esculenta HOM05D001423 ORTHO05D001412 1.7e-11 72.8 67 55.2
Dinv12323 Davidia involucrata HOM05D001423 ORTHO05D001412 6.5e-11 70.9 71 57.7
MD03G1152700 Malus domestica HOM05D001423 ORTHO05D001412 1.4e-10 69.7 68 54.4
TPR.G4664 Trifolium pratense HOM05D001423 ORTHO05D001412 2.5e-10 68.9 68 58.8
Haze_23329 Corylus avellana HOM05D001423 ORTHO05D001412 1.2e-09 66.6 71 53.5
ClCG02G022380 Citrullus lanatus HOM05D001423 ORTHO05D001412 1.6e-09 66.2 67 58.2
Nn2g14264 Nelumbo nucifera HOM05D001423 ORTHO05D001412 2.1e-09 65.9 67 58.2
CANSAT54G1815 Cannabis sativa HOM05D001423 ORTHO05D001412 2.7e-09 65.5 65 58.5
Gohir.D07G115600 Gossypium hirsutum HOM05D001423 ORTHO05D001412 3.5e-09 65.1 83 54.2
Gorai.001G123900 Gossypium raimondii HOM05D001423 ORTHO05D001412 3.5e-09 65.1 83 54.2
Nn6g34753 Nelumbo nucifera HOM05D001423 ORTHO05D001412 3.5e-09 65.1 67 58.2
Dinv31746 Davidia involucrata HOM05D001423 ORTHO05D001412 4.6e-09 64.7 71 54.9
GSVIVG01033931001 Vitis vinifera HOM05D001423 ORTHO05D001412 4.6e-09 64.7 70 54.3
SalBow1G5196 Salvia bowleyana HOM05D001423 ORTHO05D001412 6.0e-09 64.3 61 54.1
Cpa.g.sc195.40 Carica papaya HOM05D001423 ORTHO05D001412 7.9e-09 63.9 75 50.7
Medtr4g052000 Medicago truncatula HOM05D001423 ORTHO05D001412 7.9e-09 63.9 67 61.2
TWI79G1010 Tripterygium wilfordii HOM05D001423 ORTHO05D001412 7.9e-09 63.9 57 61.4
Gohir.A07G112100 Gossypium hirsutum HOM05D001423 ORTHO05D001412 1.0e-08 63.5 70 58.6
MELO3C014514.2 Cucumis melo HOM05D001423 ORTHO05D001412 1.3e-08 63.2 67 56.7
TAR633G0387 Trochodendron aralioides HOM05D001423 ORTHO05D001412 1.3e-08 63.2 67 56.7
CSS0042107 Camellia sinensis var. sinensis HOM05D001423 ORTHO05D001412 2.3e-08 62.4 57 61.4
TWI31G1092 Tripterygium wilfordii HOM05D001423 ORTHO05D001412 2.3e-08 62.4 58 56.9
arahy.Tifrunner.gnm1.ann1.UUW3MN Arachis hypogaea HOM05D001423 ORTHO05D001412 3.9e-08 61.6 70 55.7
Psat7g187080 Pisum sativum HOM05D001423 ORTHO05D001412 3.9e-08 61.6 68 54.4
Ciclev10028409m.g Citrus clementina HOM05D001423 ORTHO05D001412 5.1e-08 61.2 54 61.1
Duzib170G0364 Durio zibethinus HOM05D001423 ORTHO05D001412 6.7e-08 60.8 70 58.6
MD11G1172700 Malus domestica HOM05D001423 ORTHO05D001412 6.7e-08 60.8 69 52.2
Atru.chr3.3142 Acer truncatum HOM05D001423 ORTHO05D001412 8.7e-08 60.5 49 65.3
Ca_29923_v3 Cicer arietinum L. HOM05D001423 ORTHO05D001412 8.7e-08 60.5 68 52.9
Lj1A261G28 Lonicera japonica HOM05D001423 ORTHO05D001412 1.9e-07 59.3 45 64.4
Rhsim01G0202000 Rhododendron simsii HOM05D001423 ORTHO05D001412 1.9e-07 59.3 70 54.3
Cc06_g06370 Coffea canephora HOM05D001423 ORTHO05D001412 3.3e-07 58.5 66 51.5
Prupe.6G139900 Prunus persica HOM05D001423 ORTHO05D001412 5.7e-07 57.8 65 56.9
CANSAT64G1345 Cannabis sativa HOM05D001423 ORTHO05D001412 7.4e-07 57.4 61 54.1
Lalb_Chr19g0136301 Lupinus albus HOM05D001423 ORTHO05D001412 7.4e-07 57.4 67 49.3
Oeu039620.1 Olea europaea HOM05D001423 ORTHO05D001412 7.4e-07 57.4 68 47.1
CsaV3_6G038510 Cucumis sativus L. HOM05D001423 ORTHO05D001412 9.6e-07 57.0 67 52.2
Manes.08G031600 Manihot esculenta HOM05D001423 ORTHO05D001412 9.6e-07 57.0 47 59.6
Hma1.2p1_1442F.1_g283780 Hydrangea macrophylla HOM05D001423 ORTHO05D001412 1.3e-06 56.6 71 50.7
CsaV3_7G027730 Cucumis sativus L. HOM05D001423 ORTHO05D033902 1.6e-06 56.2 67 52.2
Migut.J00719 Erythranthe guttata HOM05D001423 ORTHO05D001412 1.6e-06 56.2 60 53.3
Eucgr.J00539 Eucalyptus grandis HOM05D001423 ORTHO05D001412 2.8e-06 55.5 67 49.3
Phvul.011G097700 Phaseolus vulgaris HOM05D001423 ORTHO05D001412 2.8e-06 55.5 68 50.0
Sabra16G0075200 Salix brachista HOM05D001423 ORTHO05D001412 2.8e-06 55.5 72 51.4
Dinv17084 Davidia involucrata HOM05D001423 ORTHO05D001412 3.7e-06 55.1 44 63.6
arahy.Tifrunner.gnm1.ann1.1J1N84 Arachis hypogaea HOM05D001423 ORTHO05D001412 4.8e-06 54.7 45 51.1
Oeu020153.1 Olea europaea HOM05D001423 ORTHO05D001412 4.8e-06 54.7 68 48.5
PSO339G3478 Papaver somniferum HOM05D001423 ORTHO05D001412 4.8e-06 54.7 78 46.2
PSO384G4180 Papaver somniferum HOM05D001423 ORTHO05D001412 4.8e-06 54.7 78 46.2
CSS0014737 Camellia sinensis var. sinensis HOM05D001423 ORTHO05D033902 6.2e-06 54.3 56 55.4


User provided reference genes

Program Settings