Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 1.0e-118 430.3 240 100.0
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 3.5e-87 325.5 239 76.6
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 1.2e-71 273.9 240 66.7
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 3.5e-71 272.3 240 66.2
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 4.3e-69 265.4 240 65.0
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 1.2e-63 247.3 244 61.5
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 7.1e-56 221.5 244 56.1
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 3.5e-55 219.2 240 55.0
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 3.0e-54 216.1 243 55.1
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 1.9e-53 213.4 246 55.7
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 9.6e-53 211.1 243 55.1
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 2.1e-52 209.9 237 54.9
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 2.1e-52 209.9 237 54.9
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 2.1e-52 209.9 244 52.9
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 1.4e-51 207.2 240 53.8
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 2.4e-51 206.5 240 54.6
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 9.0e-51 204.5 240 54.6
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 4.5e-50 202.2 241 51.9
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 4.5e-50 202.2 244 51.2
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 5.8e-50 201.8 247 52.6
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 5.8e-50 201.8 244 55.3
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 7.6e-50 201.4 253 53.4
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 1.7e-49 200.3 240 53.3
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.2e-49 199.9 244 52.9
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 6.4e-49 198.4 239 52.7
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 1.4e-48 197.2 197 57.4
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 4.2e-48 195.7 239 54.4
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 5.4e-48 195.3 215 53.0
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 1.2e-47 194.1 251 51.8
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 2.7e-47 193.0 245 52.2
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 1.0e-46 191.0 244 51.6
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 1.3e-46 190.7 249 50.6
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.8e-46 190.3 247 50.6
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.3e-46 189.9 240 51.7
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 3.0e-46 189.5 250 49.6
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 3.9e-46 189.1 267 47.9
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 1.1e-45 187.6 242 51.2
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 2.5e-45 186.4 247 50.2
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.3e-45 186.0 247 50.2
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 3.3e-45 186.0 242 51.2
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 3.3e-45 186.0 242 50.8
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 9.6e-45 184.5 244 51.2
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 1.3e-44 184.1 237 50.2
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 6.2e-44 181.8 247 49.8
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 8.1e-44 181.4 238 50.8
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 8.1e-44 181.4 241 49.0
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 1.4e-43 180.6 245 49.0
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 1.8e-43 180.3 241 49.8
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 1.8e-43 180.3 243 49.0
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 2.4e-43 179.9 239 47.7
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 2.4e-43 179.9 239 47.7
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 2.4e-43 179.9 242 51.7
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 6.9e-43 178.3 244 48.0
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 9.0e-43 177.9 243 49.0
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 9.0e-43 177.9 238 48.3
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 1.5e-42 177.2 242 47.1
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 2.6e-42 176.4 241 49.0
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 2.6e-42 176.4 240 48.3
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 4.5e-42 175.6 240 48.3
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 4.5e-42 175.6 255 44.7
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 5.8e-42 175.3 245 47.3
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 9.9e-42 174.5 237 48.5
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 9.9e-42 174.5 243 49.8
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 9.9e-42 174.5 243 46.9
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 9.9e-42 174.5 239 47.7
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 1.7e-41 173.7 244 48.0
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 1.7e-41 173.7 241 46.5
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 1.7e-41 173.7 241 46.5
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 2.2e-41 173.3 242 49.2
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 2.2e-41 173.3 242 48.8
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 2.2e-41 173.3 241 46.5
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 2.9e-41 172.9 240 47.5
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 4.9e-41 172.2 261 45.2
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 8.4e-41 171.4 250 45.6
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 1.1e-40 171.0 237 47.7
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 1.4e-40 170.6 265 44.5
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 1.9e-40 170.2 239 46.9
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 2.4e-40 169.9 242 46.7
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 3.2e-40 169.5 243 49.8
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 4.2e-40 169.1 285 42.1
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 7.1e-40 168.3 237 44.7
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 9.3e-40 167.9 249 46.6
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 1.2e-39 167.5 253 45.5
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 6.0e-39 165.2 238 45.8
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 7.9e-39 164.9 241 45.2
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.0e-38 164.5 246 44.7
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 1.3e-38 164.1 243 45.7
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.8e-38 163.7 200 52.5
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 2.3e-38 163.3 242 44.6
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 6.7e-38 161.8 243 43.6
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 6.7e-38 161.8 240 44.2
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 1.1e-37 161.0 242 45.9
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 1.9e-37 160.2 131 64.1
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 3.3e-37 159.5 246 46.3
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 4.3e-37 159.1 240 44.6
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 7.4e-37 158.3 249 47.8
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 7.4e-37 158.3 243 45.3
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 9.6e-37 157.9 248 41.5
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 1.3e-36 157.5 237 46.4
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 2.1e-36 156.8 242 45.9
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 2.1e-36 156.8 269 44.6
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 2.4e-35 153.3 242 45.0
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 4.0e-35 152.5 239 42.3
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 1.2e-34 151.0 239 46.4
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.5e-34 150.6 237 43.5
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 2.0e-34 150.2 122 63.9
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 7.6e-34 148.3 289 40.1
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 1.3e-33 147.5 253 41.1
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 9.3e-32 141.4 222 49.5
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.2e-31 141.0 237 41.4
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 1.2e-31 141.0 116 60.3
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 1.2e-31 141.0 116 60.3
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 1.2e-31 141.0 228 46.5
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 2.1e-31 140.2 207 42.0
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 2.1e-31 140.2 242 41.3
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 3.5e-31 139.4 249 40.2
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 1.8e-30 137.1 131 55.0
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 1.8e-30 137.1 131 55.0
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 3.0e-30 136.3 133 55.6
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 9.7e-29 131.3 141 53.9
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 6.3e-28 128.6 143 58.0
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.1e-27 127.9 148 48.6
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 9.0e-27 124.8 265 39.2
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 3.4e-26 122.9 202 44.1
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 1.7e-25 120.6 219 40.6
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 1.0e-22 111.3 259 33.2
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 2.3e-22 110.2 139 49.6
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 8.7e-22 108.2 133 50.4
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 2.5e-21 106.7 118 50.0
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 3.7e-20 102.8 123 48.0
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 4.8e-20 102.4 97 59.8
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.4e-19 100.9 246 37.8
Haze_00727 Corylus avellana HOM05D002737 ORTHO05D005828 5.3e-19 99.0 157 43.9
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 5.9e-18 95.5 82 65.9
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 2.2e-17 93.6 240 34.6
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 6.5e-17 92.0 117 41.9
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 2.5e-16 90.1 71 69.0
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 9.4e-16 88.2 74 63.5
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 2.6e-13 80.1 197 37.6
AagrBONN_evm.TU.Sc2ySwM_368.3190 Anthoceros agrestis HOM05D000001 ORTHO05D072262 2.6e-10 70.1 52 71.2
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 2.6e-10 70.1 63 58.7
Cpa.g.sc23.121 Carica papaya HOM05D002737 ORTHO05D005828 1.7e-09 67.4 150 36.7
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 2.2e-09 67.0 203 30.0
Cfa026041 Carpinus fangiana HOM05D002737 ORTHO05D005828 3.8e-09 66.2 100 42.0
Rhsim13G0195400 Rhododendron simsii HOM05D002737 ORTHO05D005828 2.3e-06 57.0 146 32.2


User provided reference genes

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