Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 2.7e-52 208.4 106 100.0
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 6.2e-28 127.5 97 66.0
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 7.5e-26 120.6 105 61.9
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 6.6e-22 107.5 97 58.8
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 2.0e-18 95.9 78 65.4
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 3.4e-18 95.1 120 50.8
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 1.7e-17 92.8 103 51.5
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 4.1e-16 88.2 102 48.0
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 7.1e-16 87.4 103 52.4
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 4.6e-15 84.7 104 49.0
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 4.6e-15 84.7 93 53.8
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 1.0e-14 83.6 110 49.1
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 3.0e-14 82.0 104 48.1
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 1.2e-12 76.6 107 47.7
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 1.2e-12 76.6 95 51.6
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 2.8e-12 75.5 86 47.7
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 6.2e-12 74.3 99 42.4
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 1.4e-11 73.2 103 42.7
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 3.1e-11 72.0 96 41.7
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 6.8e-11 70.9 82 50.0
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 6.8e-11 70.9 101 48.5
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 6.8e-11 70.9 101 48.5
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 1.5e-10 69.7 77 48.1
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 1.5e-10 69.7 101 48.5
FvH4_6g16343 Fragaria vesca HOM05D022265 ORTHO05D010490 3.4e-10 68.6 102 42.2
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 4.4e-10 68.2 103 36.9
FAN09G3467 Fragaria x ananassa HOM05D022265 ORTHO05D010490 5.8e-10 67.8 81 48.1
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 2.2e-09 65.9 103 38.8
RcHm_v2.0_Chr3g0470211 Rosa chinensis HOM05D022265 ORTHO05D010490 3.8e-09 65.1 108 43.5
FAN05G4022 Fragaria x ananassa HOM05D022265 ORTHO05D010490 4.9e-09 64.7 81 46.9
FAN02G1308 Fragaria x ananassa HOM05D022265 ORTHO05D010490 8.4e-09 63.9 102 43.1
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 1.4e-08 63.2 78 43.6
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 1.9e-08 62.8 96 46.9
VMungo0507G0001 Vigna mungo HOM05D008514 ORTHO05D010490 7.1e-08 60.8 104 43.3
Peaxi162Scf00429g00081 Petunia axillaris HOM05D008514 ORTHO05D010490 1.6e-07 59.7 81 40.7
Hma1.2p1_0101F.1_g049390 Hydrangea macrophylla HOM05D008514 ORTHO05D010490 2.1e-07 59.3 34 67.6
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 2.7e-07 58.9 94 40.4
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 2.7e-07 58.9 88 44.3
CsaV3_1G015250 Cucumis sativus L. HOM05D029204 ORTHO05D010490 7.8e-07 57.4 112 42.9
Nitab4.5_0003419g0020 Nicotiana tabacum HOM05D008514 ORTHO05D010490 1.0e-06 57.0 67 44.8
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 2.3e-06 55.8 95 37.9
Nitab4.5_0008285g0040 Nicotiana tabacum HOM05D008514 ORTHO05D010490 3.9e-06 55.1 27 77.8
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 3.9e-06 55.1 93 38.7
Sed0021652 Sechium edule HOM05D029204 ORTHO05D010490 3.9e-06 55.1 67 44.8
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 8.6e-06 53.9 96 38.5
Solyc11g071380.1 Solanum lycopersicum HOM05D008514 ORTHO05D010490 8.6e-06 53.9 66 42.4
Sopen11g029060 Solanum pennellii HOM05D008514 ORTHO05D010490 8.6e-06 53.9 66 42.4


User provided reference genes

Program Settings